Pseudomonas sp. FH4, H097_RS06170
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. FH4 scf_29086_33.1_contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGCGGCGGTTTGCTGCTGGTGTCTCAGTTCACCCTGGCAGCCGATACCAAGAGCGGCTTGCGTCCCAGCTTCTCCACGGCGGCTCCTCCGGCGCTGGG CGAGGCGCTTTTCGAGCACTTGTTGTTACAAGCGCAACAATTGCATGGCACTGTGGCGTCGGGGCGTTTTGGCGCGGATATGCAGGTGCATTTGGTCAAT GACGGGCCGGTCACCTTCCTTTTGCAGACCTGATTGTATGAAAAACGACTTTTAATGCGCAAAAACGCAAGTTTTCGCTACAAATACTTCGCTGCCCCTG CTGCGTTATCTCACCGGCTACTAGATAATCGCGCGCTACGGGGATCAGCGTAAATTGGTCCATTTTTGACTTAGGTAGAGACTTGTCCGAGTGCCGTTGG GGAATCATTTAGCCCCTTCGGAGTCGGAACAATGCTCGCCAACCTGGCATATAGATAGCTGGCCGTTGGTTTTTTGATCTGTTTTCGGCGAGGGTTGCTC
|
|
| DNA Sequence for Gene |
>H097_RS06170
GTGATTGTTAGTCCCTGTAATGCACCAAAATTGTCTGCCAAACGGTTGCGAAACGCACTGGTAACGGGCTCTGCCCTGTTTTGCCTGTTCGGCGCGGGTC AACTGTGGGCATTCAGTCTGGACGATGTGTCGGCCAAGGCAAAAGAGCTGGCCGGGCAGAAATACGAAGCCCCGCGCAGCAATCTGCCGAACGAATTCCG CGAAATGAAGTTCGCTGACTACCAGAAAATTCGTTTCCGCAATGAAAAGGCCGAGTGGGCCGATCAGAAAACCCCGTTCAAGCTGTCCTTCTATCACCAG GGCATGCACTTCGATACGCCGGTGAAGATCAACGAAGTCACCGCGACCGACGTCAAGGAAATCAAGTACGACCCGACGCGTTTCGACTTCGGTGACGTCA AGTTCGATCCCAAAGCCACCGAACAGCTGGGTTATGCCGGTTTCCGTGTGCTGTACCCGATCAACAAGGACGACAAGCAAGACGAAATCATGACCATGCT CGGCGCCAGCTATTTCCGCGTTGTGGGCAAGGACCAGGTCTACGGCCTGTCCGCCCGTGGCATGGCAATCGACACCGCGCTGCCGTCCGGCGAAGAGTTC CCGCGTTTCACCGAGTTCTGGATCGAGCGTCCAAAGCCGGGTGACAAGCACCTGGTGATCTTTGCCCTGCTGGACTCGCCACGGGCCACTGGTGCTTATC GCCTGATCCTGCGCCCGGGCACCGACACCATTGTCGACGTCAAGTCGCAGATGTTCCTGCGCGACAAGGTCAGCAAGCTGGGCGTTGCCCCGCTGACCAG CATGTTCCTGTTCGGCGCCAACCAGCCGTCCAAGGTCCTCAACTACCGTCGCGAACTGCACGATTCCAGCGGCCTGTCGATCCATGCCGGTAACGGCGAG TGGATCTGGCGCCCGCTGAACAACCCTAAACACCTGTCGGTCAGCAACTTCTCGGTGGAAAACCCGCGTGGTTTCGGCCTGTTGCAGCGTGGTCGCAACT TCAGCCAGTACGAAGACCTCGACGACAACTACGACAAGCGCCCAAGCGCCTGGATTGAGCCTGAAGGCGATTGGGGCAAGGGTTCGGTCGATCTGGTAGA GATTCCGACCGCCGATGAAACCAACGACAACATCGTTGCGTTCTGGAGCCCGGCCGAACTGCCTAAGCCAGGTGAGCCGCTGGACGTCGCCTACCGTCTG CACTGGACCCTGGACGATGCACCGTTCCACTCGCCAGACAGCGCCTGGGTCAAGCAGACCCTGCGTTCGACCGGTGACGTGAAACAATCGAACCTGATCC GCCAGCCAGATGGCAGCGTGGCCTATCTGGTGGACTTCGAGGGCCCGTCCCTCAAGGCCTTGAAGCCAGATGCAGCAGTGCGCGGCCAGGTCAGCGTCGG TGAAAACGGCGAAGTCGTGGAAAACAGCGTGCGCTACAACCCGCACACCAAGGGCTGGCGCCTGACCCTGCGCTTGAAGATCAAGGATGCGGGCAAACCG ACCGAAATGCGTGCGGCCCTGGTCCAGGATATCGTCAAGAGCGAGCCAGAGCAGGTTTCCACCCAAGTCCTGAAGGCTGACAAAGTCTTGGCCAAGCAAC ACGAGAAGCACGCCAAGAAAGACGCCAAGGACAAGCAAGACAAGCAGCCAGAAGCTGCCCCAGCCACCCCGGAACCGGTCAAGACAGAACAAGTCCTGAC TGAAACCTGGAGCAATCAGTTGCCTGCCGATGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTCTCAAGCCCAGCCAGAGACTCTTGCCGAGTACCTGGCGCATCTTCCGATGACCGACGAGCAGCGCGCCGAACTGGCGGGCTGCAAGTCCTTCTCCGAG CTGCACGAGCGCCTGTCGTCCTCGACTTTTGATGCGCCTGTGGATGCTGCACAGGCGTCGGTTGGCCGTCGGTTGACCCTGAGCACTGCCGAAGAACTGG CAGACGCCGAAATGCTGGTGCTCGATGCCAGCGGTCGGGTTTGCCTGAAGGCCACGCCGCCGATTCGTCGCACCAAAGTGGTGCCCGAGCCTTGGCGCAC CAATATCCTGGTACGCGGCTGGCGCCGGCTGACGGGTCGCACCAATCCGCCGGAACCGAAAAAAGACGAGCGCGTGCTGCCCGCTGCCCGCTGGCGCACC GTCGGTTCGATCCGCCGCTATATCCTGCTGGTGCTGATGCTCGGCCAGACGATTGTGGCGGGCTGGTACATGAAAGGCATCATGCCTTACCAGGGTTGGT
|
|
| Amino Acid Sequence |
>glucan biosynthesis protein G
MIVSPCNAPKLSAKRLRNALVTGSALFCLFGAGQLWAFSLDDVSAKAKELAGQKYEAPRSNLPNEFREMKFADYQKIRFRNEKAEWADQKTPFKLSFYHQ GMHFDTPVKINEVTATDVKEIKYDPTRFDFGDVKFDPKATEQLGYAGFRVLYPINKDDKQDEIMTMLGASYFRVVGKDQVYGLSARGMAIDTALPSGEEF PRFTEFWIERPKPGDKHLVIFALLDSPRATGAYRLILRPGTDTIVDVKSQMFLRDKVSKLGVAPLTSMFLFGANQPSKVLNYRRELHDSSGLSIHAGNGE WIWRPLNNPKHLSVSNFSVENPRGFGLLQRGRNFSQYEDLDDNYDKRPSAWIEPEGDWGKGSVDLVEIPTADETNDNIVAFWSPAELPKPGEPLDVAYRL HWTLDDAPFHSPDSAWVKQTLRSTGDVKQSNLIRQPDGSVAYLVDFEGPSLKALKPDAAVRGQVSVGENGEVVENSVRYNPHTKGWRLTLRLKIKDAGKP TEMRAALVQDIVKSEPEQVSTQVLKADKVLAKQHEKHAKKDAKDKQDKQPEAAPATPEPVKTEQVLTETWSNQLPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|