Pseudomonas sp. FH4, H097_RS09620

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00563	EAL domain	IPR001633	EAL domain	607	838	2.5E-67
CDD	cd00130	PAS	IPR000014	PAS domain	321	416	4.46974E-4
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	431	586	8.4E-46
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	425	592	7.3E-41
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	602	853	9.1E-91
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	290	848	0.0
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	429	600	8.4E-56
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	427	589	4.9E-41
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	435	592	2.04E-48
Pfam	PF05228	CHASE4 domain	IPR007892	CHASE4	75	223	7.8E-18
SMART	SM00052	duf2_2	IPR001633	EAL domain	601	843	4.0E-109
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	301	417	2.97E-13
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	310	425	3.9E-11
SMART	SM00091	pas_2	IPR000014	PAS domain	312	378	4.9E-7
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	300	417	1.6E-13
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	431	589	6.77248E-61
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	419	591	1.2E-60
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	606	850	5.1E-83
CDD	cd01948	EAL	IPR001633	EAL domain	607	843	1.59787E-101

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.