Pseudomonas sp. FH4, H097_RS10100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FH4 scf_29086_26.1_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCGGCCAGCGCTTCCTGGAAATCTGGTCGGGCTTGCCGGTGCTGTACCTGCTGATCATCCTCGCCAGCTTCGTGCAGCCCAACTTCTGGTGGCTGCTG GGGATCATGCTGCTGTTTTCGTGGATGAGCCTGGTGGACGTGGTGCGCGCCGAATTCCTACGCGGGCGCAACCTGGAATATGTGCGTGCGGCACGGGCGC TGGGCATGCAGAACGGTGCGATCATGTTCCGCCATATCCTGCCCAACGCCATGGTCTCGACCATGACCTTCATGCCCTTCATCTTGACCGGCGCCATCGG CACCCTGACCGCCCTGGACTTCCTCGGCTTCGGCCTGCCCGCCGGCTCGCCGTCCCTGGGCGAACTGGTGGCCCAGGGCAAATCCAACCTACAGGCGCCG TGGCTGGGCATCAGCGCGTTCGCTGTACTGGCGATCATGTTGAGTTTGCTGGTGTTTATCGGCGAGTCCGCTCGCGATGCCTTCGACCCGAGGAAATGAG
DNA Sequence for Gene
>H097_RS10100
ATGAATCAGGACAATCTGATCGAAGTCCGCGACCTCAGTGTCGAGTTCGTCACCGGCGAGCAGCATCAGCGCGTGGTGGAAAACATCAGCTTCGATATTC GCCGTGGGGAAACCCTGGCCCTGGTCGGCGAAAGCGGCTCCGGCAAATCGGTGACTGCCCACTCGATCCTGCGCCTGCTGCCCTACCCCCTGGCGCGGCA TCCGTCCGGCACGATCGGGTATGCCGGGCAAGATCTGCTGACCATGAAAGAAAAACCCTTGCGCCAGATCCGTGGCAACCGCATTGCGATGATCTTCCAG GAACCGATGACCTCGCTGAACCCGCTGCACTCCATCGAAAAGCAGATCAACGAAGTGCTGGGCCTGCACAAGGGCCTGACCGGCAAGGCCGCGACCCTGC GCACCCTGGAACTGCTGGAGCTGGTGGGCATTCCCGAGCCGCACAAACGTCTCAAGGCCCTGCCCCATGAACTGTCCGGCGGCCAGCGCCAGCGGGTGAT GATCGCCATGGCCCTGGCCAACGAGCCGGAGCTGCTGATCGCCGATGAGCCGACCACGGCCCTGGACGTCACCGTGCAGTTGAAGATCCTCGAACTGCTC AAGGAACTGCAGGCGCGCCTGGGCATGGCGTTGCTGCTGATCAGTCATGACTTGAACCTGGTACGGCGCATTGCCCACCGTGTGTGTGTGATGCAGCGCG GTTGCATTGTCGAACAGGCCTCCTGCGAGGAACTGTTCCGCGCCCCCCAGCACCCCTATACCCAGGAACTGCTGGCCGCCGAGCCCAGCGGTGGACCGGC CACCAACGCCATCGGCCCACCGCTGCTGGAAGTCGACGACCTGAAGGTCTGGTTCCCGATCAAGAAAGGCTTTTTGCGCAGCACCGTCGATTACGTCAAG GCGGTGGACGGTATCCACTTCAGCCTGCCCCAGGGGCAGACCCTGGGCATCGTCGGCGAAAGTGGCTCCGGCAAATCCACCCTCGGCCTGGCGATCCTGC GCTTGATCGGCAGCAAGGGCGGGATCCGTTTTGAAGGCCAGCAACTGGACCAACTGACCCAACAACAGGTGCGGCCATTGCGCCGGGAAATGCAGGTGGT GTTCCAGGACCCATTTGGCAGCCTGAACCCACGCATGTGCGTCAGCGAGATCGTTGGCGAAGGCTTGCGCATTCACAAGATCGGCACGGCAGCCGAGCAG GAAGAGGCGATTATCGCAGCGCTCAAGGAAGTCGGGCTGGATCCGCAGACCCGCCACCGCTACCCCCATGAGTTCTCCGGCGGCCAGCGCCAGCGCATTG CTATCGCCCGCGCGCTGGTGCTCAAGCCACGCTTGATCCTGCTGGATGAACCAACCTCGGCCCTGGACCGTACGGTACAGCGCCAGGTCGTGGAGCTGCT GCGCAACCTGCAGGCCAAGTACAACCTGACCTACTTGTTCATCAGCCACGACCTGGCGGTGGTCAAGGCGCTGAGCCACCAATTGATGGTGGTCAAGCAG GGCCAGGTAGTGGAACAGGGCGATGCCAAAGCCATCTTCGCCGATCCGCAGCATGCCTATACCCGGCAGTTGCTGGAGGCCGCGTTCCTGGTGCCCACAA ACATCCACCACCAATCCCTGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGCTGGCTTGCCAGCGATGGCGGAAGCACAGGCAACATCTCTGTTTGCTGACCCACCGCTATCGCTGGCAAGCCAGCTCCTACATTCGATCTTCACCAG CCGGGTGATCGCCACCTTTCGCAAAAGCAAACCAATATCATTTGCGCTGCCCACAGGCCTTTGCTTTAATCGCGACCAATTCCTATTCACGTCATGGCAT CAGCGCCGGATGGATATTGTGTCGACCTCCCCCACTTCGTTCAGTCAGCTCTACGGTAGCCACCATTCCTGGCTGCTCGGCCTGTTGCGCCGGCGTCTGA GCAACCGCTGGGATGCCGCCGACCTGGCGCAGGACACCTTTATCCGCGTGCTGAAGCGCCCGCCCGACCAGGCCGACCCGGTGCGCGAGCGTTCATACCT GGCGACCATCGCCCGCGGCCTGTGCATTGACCACTGGCGCCGTCGCCAACTGGAGCAGGCCTGGCTGCAAAGCCTCGCCGATCGCCCACAAGCGGTGCAG
Amino Acid Sequence
>microcin ABC transporter ATP-binding protein
MNQDNLIEVRDLSVEFVTGEQHQRVVENISFDIRRGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGTIGYAGQDLLTMKEKPLRQIRGNRIAMIFQ EPMTSLNPLHSIEKQINEVLGLHKGLTGKAATLRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELL KELQARLGMALLLISHDLNLVRRIAHRVCVMQRGCIVEQASCEELFRAPQHPYTQELLAAEPSGGPATNAIGPPLLEVDDLKVWFPIKKGFLRSTVDYVK AVDGIHFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSKGGIRFEGQQLDQLTQQQVRPLRREMQVVFQDPFGSLNPRMCVSEIVGEGLRIHKIGTAAEQ EEAIIAALKEVGLDPQTRHRYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRNLQAKYNLTYLFISHDLAVVKALSHQLMVVKQ GQVVEQGDAKAIFADPQHAYTRQLLEAAFLVPTNIHHQSL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site