Pseudomonas sp. FH4, H097_RS12840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FH4 scf_29086_22.1_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTTTGTCGACAACCAGGTCAACCCGGCCACCGGCACCATTCGTGGGCGCGCCGTGTTCGACAACACAGACGGGCGCTTCACCCCCGGCCTGTACGCACG CCTGAAACTGGTGGGCAGCGGCACCTACTCCGCCGTGCTGATCACCGACGAGGCCGTGGGCACTGACCTGGGCAAGAAGTTCGTACTGGTCATGGACGGC GACAACAAGTCTGCCTACCGCGCCGTCGAACTGGGGCCAAAGATCGAAGGCTTGCGCATCGTGCGCAGCGGCCTGACCAAGGACGACACGATTATCGTCA AGGGCCTGCAGCGGGTGCGTCCGGGATCGCCGGTAGCGCCGGAGACCATCCCGATGGCCAGCCAGGCCACTCTCGCCGCCTTGGCACAACAACGACAAGC GCTTGAAGCCAGCAACCTGGAGCAAGTGGCGCCGGACAACAAAGCCGCACCCAAGCTCGCCAGTGTCGCGACTCCACGCGGTTAAGGGACTACACACAAG
DNA Sequence for Gene
>H097_RS12840
ATGAATTTCTCCAAGTTCTTCATTTCGCGGCCGATCTTCGCAGCAGTGTTGTCGCTGCTGATCCTGATCGCCGGCGCGATCTCGCTGTTCCAGTTACCAA TCAGTGAATACCCGGAAGTGGTGCCGCCGACCGTTGTCGTACGGGCCAGCTTCCCGGGCGCCAACCCCAAAGTCATCGGTGAAACCGTGGCCGCGCCGTT GGAACAAGCGATCACCGGTGTCGAGAACATGCTCTACATGTCCTCGCAATCGACCGCCGACGGCAAGATCACCTTGACCATCACCTTCGCCCTGGGCACC GACCTGGATAACGCGCAGGTGCAGGTGCAGAACCGGGTGACCCGCACCCAACCCAAGCTGCCGGAAGAAGTGACGCGCATTGGTATTACCGTGGACAAGG CCTCCCCCGACCTGACCATGGTGGTGCACTTGACCTCGCCGGATCAGCGTTACGACATGCTCTACCTGTCCAACTACGCCATCCTCAATATCAAGGATGA GCTGGCGCGCCTGGGCGGTGTCGGTGATGTGCAGTTGTTCGGCATGGGCGACTACTCATTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCACGCAAC CTGACCGCCACCGATGTGGTGACCGCGATTCGCGAGCAGAACCGCCAGGTAGCGGCCGGTGCCCTCGGCGCACCGCCTGCGCCAACGGCCACCAGCTTCC AGTTGTCGGTCAACACCCAGGGACGCCTGGTCACCGAGGAAGAGTTTGAGAACATCATTATCCGCGCAGGCGATAACGGTGAAATCACCCGCCTCAAGGA CATTGCCCGGGTCGAGCTGGGTTCCAGCCAATACGCCTTGCGTTCGCTGCTCAATAACCAGCCGGCGGTGGCGCTCCCGATCTTCCAGCGCCCTGGCTCC AACGCGATCCAGATCTCCAATGAAGTACGCGACAAGATGGCGGAGCTGAAAAAGAGCTTCCCCGAAGGCATGGACTTCAGCATCGTCTATGACCCGACCA TCTTCGTGCGTGGCTCCATCGAGGCCGTGGTACACACCCTGTTCGAAGCACTGATCCTGGTGGTGCTGGTGGTGATTCTGTTCCTACAGACCTGGCGTGC CTCGATCATTCCGTTGGTAGCGGTGCCGGTATCGTTGATCGGTACCTTTGCGGTGATGCACCTGTTCGGCTTCTCGCTCAATGCCCTGTCGCTGTTTGGC CTGGTATTGGCCATCGGCATCGTGGTCGACGACGCCATCGTGGTGGTGGAGAACGTCGAACGTAATATCGAGCTGGGCCTGGAACCATTCCCGGCCACCG AAAAAGCCATGAGCGAAGTGACCGGGCCGATCATTGCCACGGCGTTGGTGTTGTGTGCGGTGTTCATTCCGGCAGCCTTTATCAGCGGCCTGACCGGGCA GTTCTACAAGCAGTTCGCCTTGACCATCGCGATCTCCACCGTGATCTCGGCCTTCAATTCCCTGACCTTGTCCCCTGCCCTGGCCGCCGTGTTGCTGCGC AGCCATGATGCGCCGAAGGATCGTTTCTCCAAGGTCCTCGACAAGGTGTTTGGCGGCTGGTTGTTCCGCCCGTTCAACCGCTTCTTCGAACGCGCCAGTG GTGGCTACGTCAGCACCGTGCGCCGGGTAATCCGCGGCAGCGGCATTGCGCTGTTCCTGTACGCTGGCCTGATGGTGCTGACCTGGTTCGGTTTTGCCCA CACCCCGACCGGTTTCGTCCCGGCCCAGGACAAGCAATACCTGGTGGCCTTCGCCCAACTGCCGGACGCTGCCAGCCTGGATCGCACCGAAGACGTGATC AAGCGCATGTCGGATATCGCCCTCAAGCAACCGGGTGTCGAAAGTGCCGTGGCCTTCCCTGGCCTGTCGATCAACGGTTTTACCAACAGCCCCAACAGCG GCATCGTGTTCGTGACCTTGAAGCCGTTTGACGAGCGCAAGGCCGTGGGCATGTCCGCTGGTGAAATCGCCGGTGCCCTGAACGGCAAGTACGCCGATAT CCAGGAAGCCTACATGGCGATCTTCCCGCCGCCGCCGGTACAGGGCCTGGGCACCATTGGCGGGTTCCGCCTGCAAGTCGAAGACCGCGGCAACCTGGGC TATGAGGAACTGTACAAAGAAGTACAGAACATCATCACCAAGAGCCACAACGTACCGGAACTGTTCGGCCTGTTTACCAGCTACACGGTCAACGTGCCCC AGGTCGATGCCGCTATCGACCGTGAAAAGGCCAAGACCCATGGCGTGGCGATCAGCGACATCTTCGACACCCTGCAGATCTACCTGGGTTCGCTGTATGC CAACGACTTCAACCGCTTTGGCCGTACTTATCAGGTCAACGTCCAGGCCGAGCAGCAGTTCCGCCTTGAAGACGAGCAGATCGGCCAGCTGAAAGTGCGC AACAACAGGGGCGAGATGATCCCGCTGGCGACCTTTATCAAGGTCAGCGACACCTCGGGGCCGGACCGCGTGATGCACTACAACGGCTTTATCACCGCCG AGATCAACGGTAACGCCGCCCCCGGCTACAGCTCGGGCCAGGCGCAAGCGGCGATCGAGAAACTGCTCAAGGAAGAACTGCCCAACGGCATGACCTACGA GTGGACTGACCTGACGTATCAGCAAATCCTCTCGGGCAATACCGCGCTGTTCGTGTTCCCGCTCTGCGTACTGCTGGCGTTCCTGGTACTGGCCGCCCAA TACGAAAGCTGGAGCTTGCCATTGGCGGTGATCCTGATCGTACCGATGACTCTGCTGTCGGCTATTACCGGGGTGATTCTGTCCGGTGGCGACAACAACA TCTTTACCCAGATCGGCTTGATCGTACTGGTGGGACTGGCCTGTAAGAACGCGATTCTGATCGTCGAATTCGCCAAGGATAAGCAGGAAGAAGGCCTCGA CCCGCTGGCTGCGGTGCTGGAAGCCTGCCGCCTGCGTCTGCGGCCGATTCTGATGACCTCGTTCGCCTTCATCATGGGCGTGGTGCCCCTGGTGCTCTCC AGCGGTGCCGGTGCCGAGATGCGCCACGCCATGGGTGTGGCGGTGTTCTCCGGGATGATCGGGGTGACCTTCTTCGGCCTGTTGCTGACGCCGGTGTTCT ACGTGTTGATCCGCCGCTATGTGGAGCGCAGCGATGCGCGCAAAGCGGCCAAGGCCTTGAAGCTGGAGACACAGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGTGAAAGTGTTCATGCCGAGCCTGCTGGTATTGGCGCTCAGCGCCTGTACCGTCGGCCCGGACTATAAAGCCCAGCAGCTGGAGGCGGCCACTATCAC GGCCGCCGCCGATGCCAAGCAATACGACCACGCCAAGTTCGAAGGTATCTGGTGGCAGCAGTTCGAAGATCCGACGCTCAACCAGTTGGTGACGCAATCG TTGCAAGGCAACCGCGATTTGCGCGTTGCATTTGCCCGCCTGCGGGCCGCCCGGGCGATTCGTGATGACGCCAGTAATGACGCGATGCCCACCATCACCA GCCGCGTCAGCAGCGATTTGGCCAAGGGCCAGATCCCTGGCCAGAGCACACGCCGGGTCAATAGCGAACGCTATGACCTGGGCCTGGACATGGCCTGGGA GCTGGACCTGTTTGGCCGCATCCAGCGCAACCTGGAAGCCAGCGACGCCGACCAGCAGGCCGCCGAAGCCGACCTCTATCAACTGCAAGTCAGCCTGATT
Amino Acid Sequence
>transporter
MNFSKFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRASFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGT DLDNAQVQVQNRVTRTQPKLPEEVTRIGITVDKASPDLTMVVHLTSPDQRYDMLYLSNYAILNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTATDVVTAIREQNRQVAAGALGAPPAPTATSFQLSVNTQGRLVTEEEFENIIIRAGDNGEITRLKDIARVELGSSQYALRSLLNNQPAVALPIFQRPGS NAIQISNEVRDKMAELKKSFPEGMDFSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIELGLEPFPATEKAMSEVTGPIIATALVLCAVFIPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLR SHDAPKDRFSKVLDKVFGGWLFRPFNRFFERASGGYVSTVRRVIRGSGIALFLYAGLMVLTWFGFAHTPTGFVPAQDKQYLVAFAQLPDAASLDRTEDVI KRMSDIALKQPGVESAVAFPGLSINGFTNSPNSGIVFVTLKPFDERKAVGMSAGEIAGALNGKYADIQEAYMAIFPPPPVQGLGTIGGFRLQVEDRGNLG YEELYKEVQNIITKSHNVPELFGLFTSYTVNVPQVDAAIDREKAKTHGVAISDIFDTLQIYLGSLYANDFNRFGRTYQVNVQAEQQFRLEDEQIGQLKVR NNRGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGNAAPGYSSGQAQAAIEKLLKEELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVILSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQEEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVLS SGAGAEMRHAMGVAVFSGMIGVTFFGLLLTPVFYVLIRRYVERSDARKAAKALKLETQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site