Pseudomonas sp. FH4, H097_RS15195

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FH4 scf_29086_18.1_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGAGTCGGCCGAAATGGTCATTGATTTGATCGGGCAGCAAAAAGCCAGCGGAATAGACGCATCGCGAATTTTCCTCGCCGGCTTTTCCCAGGGTGGCGC CGTGGTCCTACACGCCGCGTTTGTGAAATGGCAGGGTGCCCTCGGTGGCGTGCTTGCCCTCTCCACTTATGCGCCAACCTTCAGCGACGAGCTCGAACTG TCGGCGAGCCAGCAGCGAATTCCGGCGCTGTGCCTGCATGGCCAGTACGATGAAGTGGTGCAGAACGCCATGGGCCGCAGTGCCTACGAGCATTTGAAAC TGCGTGGTGTCACCGTGACATGGCAGGAATACCCAATGGGTCACGAAGTGTTACCCGAGGAAATCCGCGATATCGGCACTTGGCTGGCCGGCCGCCTGGG TTGAAAACCAGGCATTGTGTAGCCGCATGACCAACACACTACGCCGCGCCCGATTCTTGCATTACACTGGCCGGCGTACATTCCTTAACCAATTGATGAG
DNA Sequence for Gene
>H097_RS15195
ATGACCGTGCTCAAAGCACTCAAGAAGATGTTCGGTAAAAGCGAGGCTGAACCACTCGCCCCTGTTCCCAGCGCCCCTGTCCAAGCTCCCGGCAGCCGCA ATGACGGTAAACAGCCTGGCCGAACCGCGCCCGTTGCCTCACCAAAACAGCCGCCAGCCGCTACCGCCGTGCAGCCCGCTGAACCCGCACACGTGGAAAA ACCGCGCCGCGAACGTGCGCCAAAACCCGTGGTCAAGCCGTGGAAACTGGAAGACTTCGTGGTCGAGCCGCAAGAGGGCAAGACCCGCTTTCATGACTTC AAGCTGGCCCCGGAACTGATGCACGCCATCCAGGACCTGGGTTTCCCGTATTGCACACCGATCCAGGCACAAGTGCTGGGCTTTACCCTGGCCGGCAAAG ACGCCATTGGCCGCGCCCAGACCGGTACCGGCAAGACCGCTGCCTTCCTGGTTTCCATCATTACCCAACTGCTGCAGACCCCGCCGCCCAAAGAACGCTA CATGGGCGAGCCACGGGCGCTGATCATCGCACCGACCCGGGAGCTGGTGGTACAAATCGCCAAGGACGCCGCCGACCTGACCAAATACACCGGCCTCAAC GTCATGACGTTTGTGGGCGGCATGGACTTCGACAAGCAGCTCAAGCACCTGGAAGCGCGGCACTGCGACATCCTCGTGGCTACGCCGGGCCGTTTGCTGG ACTTCAACCAGCGCGGCGACGTGCATCTGGACATGGTTGAAGTGATGGTGCTGGATGAAGCCGACCGGATGCTCGACATGGGTTTCATCCCACAAGTGCG CCAGATCATTCGCCAGACCCCGCCGAAAAACGAGCGTCAGACTTTGCTGTTCTCCGCGACCTTCACCGAAGACGTGATGAACCTCGCCAAGCAGTGGACC ACTGACCCGTCCATCGTCGAAATCGAAGCAGAAAACGTCGCCAGCGAAAACGTCGAACAGCATATCTATGCCGTGGCCGGTGCCGACAAATACAAACTGC TTTACAACCTGGTCAACGACAACGGCTGGGAACGGGTCATGGTGTTTGCCAACCGCAAGGACGAAGTGCGCCGCATCGAAGAACGCCTGGTGCGCGATGG CGTCAACGCCGCGCAACTGTCGGGCGATGTGCCGCAGCACAAGCGCATCAAGACCCTGGAAGGCTTTCGCGAGGGCAAGATCCGCGTGCTGGTGGCCACT GACGTGGCGGGTCGCGGGATTCATATCGACGGCATCAGCCACGTGATCAACTTCACCCTGCCGGAAGTGCCGGACGACTACGTACACCGCATCGGCCGTA CCGGGCGTGCAGGTGCTGCCGGGGTGTCGATCAGCTTTGCCGGTGAAGATGATTCGTACCAGTTGCCGTCGATCGAGGCGCTGCTGGGGCGCAAGATCAG CTGTGAGACACCGCCGACGCACTTGTTGCGCGCCGTAGAACGCAAGCGCCCTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTGGAATGCGGTAAAAAATGTGGGAGCGGGCTTGCTCGCGATAGCGATAGATCAGTCAATAGATTCGGCGACTGATACACCGCTATCGCGAGCAAGCCC GCTCCCACATTAGTCTTGCGCTATCTTCAAGTACCTATTCCAGGAGGAACCCATGACCCAAGCCGACTACATCATCATCGGCGGCGGCATTGCCGGTGCC TCCGCCGGTTACTGGCTGTCCCGACACGCCCGCGTCATCGTGCTGGAGCGTGAGTCCATGCCGGGCTATCACTCCACCGGACGCTCGGCCGCCCTGTACA TCGCCGCCTACGGCACCCCGCAAGTGCGCGCCCTGACCCTGGGCAGCCGCGAATTCTTCGATCATCCGCCCACAGGTTTTACCGAGCATCCATTGCTCAC GCCCCGTGGCGAAGTCCTCGTGGATTTTATCGGCGACCCCGACGAGCTGCAGCGCCAGTACCTGAGCGCCAAGGCCCTGGTCCCGCCAACCCGCCTGCTT
Amino Acid Sequence
>ATP-dependent RNA helicase RhlB
MTVLKALKKMFGKSEAEPLAPVPSAPVQAPGSRNDGKQPGRTAPVASPKQPPAATAVQPAEPAHVEKPRRERAPKPVVKPWKLEDFVVEPQEGKTRFHDF KLAPELMHAIQDLGFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLVSIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAADLTKYTGLN VMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKNERQTLLFSATFTEDVMNLAKQWT TDPSIVEIEAENVASENVEQHIYAVAGADKYKLLYNLVNDNGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVAT DVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDDSYQLPSIEALLGRKISCETPPTHLLRAVERKRP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site