Pseudomonas sp. FH4, H097_RS18965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1829 1947 1.07E-36
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 98 1.9E-7
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 616 740 4.52E-22
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1480 1666 4.9E-50
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 758 846 2.5E-10
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1195 1293 9.00837E-15
Coils Coil Coil - - 66 86 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 754 851 0.063
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1672 1804 7.1E-21
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1055 1177 1.7E-24
MobiDBLite mobidb-lite consensus disorder prediction - - 589 612 -
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1342 1481 3.6E-11
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1832 1943 6.78089E-32
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 755 877 8.37E-19
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1482 1666 4.4E-59
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1741 1801 2.8E-18
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1530 1666 8.4E-13
Coils Coil Coil - - 1373 1400 -
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1195 1328 2.4E-32
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 128 1.57E-17
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 615 743 5.4E-23
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1057 1157 1.5E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 616 720 2.1E-5
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1651 1664 4.0E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1054 1183 1.5E-24
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 896 1018 7.85E-15
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 618 742 0.0
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1526 1667 3.2E-21
Gene3D G3DSA:3.40.50.2300 - - - 1832 1951 2.5E-40
SMART SM00260 chew_2 IPR002545 CheW-like domain 1659 1803 2.7E-27
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1195 1316 1.96E-29
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1483 1664 1.57E-34
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1055 1130 7.29458E-9
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 431 546 6.15E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1627 1645 4.0E-9
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1195 1292 2.7E-9
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1571 1585 4.0E-9
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 758 815 6.61386E-5
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1197 1295 7.4E-16
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 897 1023 1.7E-12
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1832 1943 1.5E-26
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1666 1799 1.7E-22
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 129 2.1E-8
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 616 712 1.80879E-9
Coils Coil Coil - - 1138 1158 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1055 1156 0.074
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 618 702 9.3E-13
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1830 1943 1.2E-35
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 750 881 1.2E-16
Coils Coil Coil - - 1432 1470 -
Coils Coil Coil - - 862 882 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.