Pseudomonas sp. FH4, H097_RS23385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FH4 scf_29086_5.1_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTATCGACCAGGGCGGTGCCGAGCAACTGCTGGGCCATGGTGACATGCTCTACATGCCGCCCGGCACCAGCCTGCCTATCCGGGTGCACGGTGCATTTGT TTCCGATGATGAAGTGCATCGGGTGGTGGAAGCCTGGAAACTGCGCGGCGCGCCTGAATACAACGACGACATCCTCAATGGTGTCGAAGAGGCCGGCAGC GGCTTTGAAAATGGCGGCGGCAGTGGTGATGACGATGCTGAAACCGACGCCTTGTACGACGAAGCCGTGCAGTTCGTCCTGGAAAGCCGCCGCGCCTCGA TCTCTGCGGTGCAGCGTAAACTGAAGATCGGCTACAACCGCGCCGCACGTATGATCGAATCCATGGAAATGGCCGGCGTCGTCACGGCAATGAACACCAA CGGCTCGCGCGAAGTGATCGCGCCAGGGCCGATGCGCGACTGACTTCGTGCCGCGTGGCAGCACGCGGCGCGCCTTTCACATCATTCTATGAGGACTCCC
DNA Sequence for Gene
>H097_RS23385
ATGCGTCTTATCCGCATGCTGTTGTTGCCAGCCTTGGCCCTGACTGCGTTTTCGGCCCACGCTGACCAGGCATCCGTTGCGAGCCTGACCAACCTGCTGG ACAAATCCAAGACCCTGACCGCGCGCTTCTCCCAGTTGACCCTGGACGGCGGCGGCACGCAGTTGCAGGAAACGGCCGGTGAAATGGCTGTGCAGCGCCC AGGCCTGTTCTTCTGGAAAACCGACGCGCCCAACGAGCAGACCATCGTCTCCGATGGCAAGAAAGTCACGCTGTGGGACCCGGACCTGGAGCAGGCGACC ATCAAGACCCTTGACCCACGTCTGAGCCAGACCCCGGCCTTGTTGCTGTCCGGTGATGTGTCGCAGATCAGCGAGAGTTTCGAGATCACGTCCAAGCAAC AAAGCAACGTGATCGATTTCACCCTCAAGCCCAAGTCCAAGGACACACTGTTCGACAGCCTGCGCCTGTCGTTTCGCAACGGTGTGATCAACGATATGCA ACTGATCGACAGTGTTGGCCAGCGCACCAATATCCTGTTCACCGGGGTCAAGGCCAATGAGTCGGTCCCAGCCTCCACGTTCAAGTTCGACATCCCCAAG GGTGCCGATGTGATCCAGGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCGCTGCCCATGGACCTGTTTCGCAGTGACCCGATTGCCCAGCCCCTGGCCGCGCGTTTGCGCTCGACCAACCTGGATGAGTATGTCGGGCAAGAGCAC TTGCTGGCCCGCGGTAAGCCCCTGCGCGAAGCCCTGGAGCAGGGTGCCCTGCACTCGATGATTTTCTGGGGGCCGCCGGGCGTGGGCAAGACCACCCTGG CGCGGCTGCTGGCGAAAGTCTCGGACGCACACTTTGAAACAGTTTCGGCCGTGTTGGCCGGGGTCAAGGAGATCCGCCAGGCGGTGGAAGTCGCCAAACA GCAGGCCGGGCAGTACGGTCGGCGCACCATCCTGTTTGTCGATGAAGTGCATCGCTTCAACAAGTCGCAGCAGGATGCATTCCTGCCCTATGTGGAAGAC GGCACGCTGATTTTTATTGGCGCCACCACTGAAAACCCCTCGTTTGAACTCAACAATGCCTTGCTCTCGCGGGCGCGGGTGTATGTCCTCAAGAGCCTCG
Amino Acid Sequence
>membrane protein
MRLIRMLLLPALALTAFSAHADQASVASLTNLLDKSKTLTARFSQLTLDGGGTQLQETAGEMAVQRPGLFFWKTDAPNEQTIVSDGKKVTLWDPDLEQAT IKTLDPRLSQTPALLLSGDVSQISESFEITSKQQSNVIDFTLKPKSKDTLFDSLRLSFRNGVINDMQLIDSVGQRTNILFTGVKANESVPASTFKFDIPK GADVIQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site