Pseudomonas sp. FH4, H097_RS25500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FH4 scf_29086_2.1_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACGGCGGCGTGGCCAAGGCCCAGGCAATTCCCGCCAGCCTGGATTACCGCCAACCCAAGGCCCTGGCCAATGTCGGTGTGCTACCGCTGGTGCCGGGCA TCACCGCTGGGCAACTGGATGCACTGGTCGACAGCGGTATCCAGGCGCTGGTCCTGGAGTGCTTCGGCAGCGGTACCGGGCCGAGCGATAACCCAGCGTT TCTCGCCAGCCTCCAGCGTGCGCAGGAGCACAACGTAGTGGTGGTGGCAATTACCCAATGCCATGAAGGCGGCGTGGAACTGGATGTGTACGAAGCGGGC AGCCGTTTGCGCGGTGTGGGCGTTTTGTCTGGAGGCGGCATGACCCGCGAAGCGGTTTTCGGCAAATTACAGGCCCTGCTCGGCGCCGGCCTTGCAACCC ACGAAGTCCGCCGCCTGGTGGAACTGGACCTGTGCGGCGAACTGAGCTGAGCGGCATATAACTTGCTCCACTTCCAGCCATCCCCTGGCTGGAAGTTCCC
DNA Sequence for Gene
>H097_RS25500
ATGTTGCACTCCCACCTCACTACCCTCAATGCCGTTTCCCTGGTGCTCAGCACCTTCAAGGCCGAAGGCTGGCCCGCCGAAGCGCTGCTGGCCGGCAGTG GCATCTGTGCGGCGGACTTGAGCCGCGCCGACACACGCATCGCCACGCACCAGGAGATGCAGGTGTGCGCCAATGCCGTGGCCTTGCAGCGCGATATCGG GCTGATCGTGGGACAGCGAATGCACGTATCGGCCTACGGCATGCTCGGCTATGCCCTGCTCACCAGTGCCACTTTCGGTGACGCTTTGCGCCTGGCCCTG CGTTATCCGGCGCTGTTGGGAACACTGTTTGAGCTGAGCCTGGAGGAGGACGGCGAACGTATCTGGTTCACCGCCAGCGATTACCGAGAAAACCCGGCGC TGACTGCCTTCAATGTGGAGCTGTGCCTGGGGTCGTTGAAGGTTATCTGCGACGACCTGCTCGGCCACCCGCTGCCTCTGCTGGGCGCGCGCTTTGAGCA TGATGCGCCGGATTATCAGGCACGCTACGCCGAGTGCTTCGACTGCCCGTTGCAGTTCCAGGCCACTGCCAATGCGTTCGCCTTTGACCAACGCTGGCTT GCCCAACCTTTGCCTCTGGCCGATACCGTGACCCACCGGGCCATGGCTGAGCGCTGCCGCAAACAGAACACCGAATTCACCGGGCGCGAGGCCTGGCTGG GACGGGTCCGCCAGTTGCTCGCTGCACAACTGCACGCCGCACCCGGGCTGGATGGCCTGGCCCAGCAGATGAACTGTTCGCCGCGCACCCTGCGCCGGCA CCTGCATGACCTGGGCTGCAGTTACCAGGAGTTGCTGGACGAGCTGCGCTTCGAGCAGGCCAAGCAACTGTTGTCGCAAGACCAGTGGCCGATCTATCGG ATTGCCGAGGCCCTGGGGTTCAGCGAGACCGCAAGTTTTCGGCACGCATTTGTGCGCTGGAGCGGTGTGGCGCCTAGTCAATTTCGCCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGCACCGCGGTGATGCCTTCGCGAGCAAGCCCGCTCCCACATGGGGCGAATTTCGGACAGATAATTTGGCCGTATTAATCCCCTTTTGGCCGCTCCTG CCGTTCTCTTAAATCGCGCTCGCCGCAAGACTGCATTCACCGATACAGCCTGCGGAGAACAACAAATGCTGACGATCTACTCAGACGATCACCACCTGCA CCACGGCCGTTGCGAACTGATGGACGGGCAATTGATGCCCTGCTTTGAAATGCCCTCGCGCGCCGACCACGTGCTGCAACGGGTCAAGGACCGCGAACTG GGCCCGGTGCAGGCGCCCCAGGATTTCGGCCTGGCACCGCTGCAGCGTATCCACAGCCGTGCCTACCTGGACTTCTTCAAGGGGGCTTGGGCGCGCTGGA CCGAGTTCGGCCAGGACGGCGACCTGTTGCCCTACACCTGGCCCGCACGCACCTTGCGGCGTGTACTGCCCACCAGCCTGCATGGCCAATTGGGCTATTA
Amino Acid Sequence
>AraC family transcriptional regulator
MLHSHLTTLNAVSLVLSTFKAEGWPAEALLAGSGICAADLSRADTRIATHQEMQVCANAVALQRDIGLIVGQRMHVSAYGMLGYALLTSATFGDALRLAL RYPALLGTLFELSLEEDGERIWFTASDYRENPALTAFNVELCLGSLKVICDDLLGHPLPLLGARFEHDAPDYQARYAECFDCPLQFQATANAFAFDQRWL AQPLPLADTVTHRAMAERCRKQNTEFTGREAWLGRVRQLLAAQLHAAPGLDGLAQQMNCSPRTLRRHLHDLGCSYQELLDELRFEQAKQLLSQDQWPIYR IAEALGFSETASFRHAFVRWSGVAPSQFRP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site