Pseudomonas sp. PH1b, U873_RS0133925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig66, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTCCCGAGTTCGCCGTACAGACGCTATACAGCCATCATCATGGCTGGCTGAACAGCTGGTTGCGTCAACGCCTGGGCAACGCCGCGGATGCTGCTGACC TGGCCCAAGATACTTTCGTACGCCTGTTGCAGAAGACCGAACGCCTGGAGCTCAAGGCGCCACGGGCCTTCTTGCGCACCATCGCCCGGGGCCTGGTGAT CGATCATTGGCGACGTGAAGAAATCGAACGCGCCTACCTGGAAACCATCGCCCACTTACCTGAAGCCGAGACCCCCGGGGCTGAAGCTCGGACACTGATT CTAGAGCTGCTGGAAAGCATTGCGCGCATGCTCGAAGGATTGAAGCCCAAAGTGCGCCAGGCGTTTCTCCTGGCTCAGTGCGAAGAACTTACCCACAAGC AGATAGCCCAGCAGATGGGCCTGTCCCTACGCACCGTGGAGCGCTATGTGGCCGAGGCGCTCTATCACTGCTACCTGCTGCGCTATGAGAGCTGACGCCT
DNA Sequence for Gene
>U873_RS0133925
GTGGATAACTATTCCGGCAGTGTGCCACTCCAACCCAACCCCGATCACCTGGTGGTCAAGCAGGCGATCAACTGGCTGCTGCGCCTGCGCAACAACGGCG CCAACTCCAAGCTGCAGCAGCAGTGCGATCAGTGGCGGGCCGCACATCAGGAGCACGAGCTGGCCTGGCAGCGGGTGCAGTCGTTGCATCAGGAACTCAA TGCCAACCTGCGAGCGGTGCCCGGGGCCCAAGTGGCATTGCACACCCTGGAAAACAGCAGTCAGCGCCTGGGCCGGCGCCAGGCCCTGAAACTGCTCAGT GGCGCCCTGCTCATGGGGTCCAGCGCCTGGGTCGGCGGCGACCTGCTGGGCTGGCAACAATGGACCGCGGATTTCGCCACGGCGGTCGGCGAGCAACGGG GTTTCCAACTGCCCGACGGCACCCGCCTGGAACTCAATACCAACAGTGCTGCAGACCTGGACTTCAACGCGCAACAACGCCTGATCAAATTGCGCCATGG CGAAATCATGGTGTCTTGTGGCGGCGATCAGGACGGCATCCGGCGTCCGCTGCTGGTGGAGAGTCGCCACGCCCTGCTGGAAGGCTTCGATGCCCGTTTC GTGGTGCGCCAGGAAGATCGCTGTACGCGCCTGAGCGTGACGCACGGCAGTGTGGCCATTCATTCGCCGCACACTGCAGACGGCCGTACCGCCCGAGTAG AGGCGGGCCAGAACTATCGGATCGATCACCGACTGGCAGAACCGGTCTCGCCGCTGGCAATGGACGTCGGTGCCTGGGCCGACGGCCTGATCGTGACTCG CAACATGCGCCTGGATGATTTTCTGCTGGAGGTGGGCCGTTATCGCCATGGCTACCTGGGATGCACGGCGGCCATTGCCGACTTGCGCCTGTCCGGGGTG TTCCGCCTGGAAGACACCGAGAAGCTGCTGGCCATCCTACCCCAGACCCTGCCGGTGCAGCTGCGCTACCGCACACGCTGGTGGGTGACCCTGGAAGCTG TGGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTGGCCTGTCGAGATTTTTTTTGGCGGGTTTGCGCTGGACGTCCGGCTTAGTCAGTAAGCACTTCAATCTGCTTCCTGCGACTTCAACGGAACCCATCA TGACTGTCCGCGATCACCGCCCAAGCTTTCTCTGCGCCCAGACTTTACGCCCCGCTGTCCGTGCCGCCCTGCTGTGCTCCAGCATCGGCCTTGGGGCCAT AGCGCCGCTGGTGCAGGCCGCCACCAACGGTGCAGAGGCTCCCCACCACAGCTATAACGTAGCGCCGGGCAATCTCAGCGATGCACTCAACCAGTTCGCT CGCCAGGCAGGGATCACCCTGGCGAGCACTCCTGCCCAGACTCAGGGCCGTCAGTCGCCCGGGCTGCAGGGCAATTATTCGATCACCCAGGGCCTGAACC AGTTGTTGCTGAACTCGGGACTTGAGGCGGTCAGCCAGGATGGCAGCAGTTATGTCCTGCGCGCCGAGCCCCAAGGCAGTGCCCTGGCCCTGCCGACCAC
Amino Acid Sequence
>peptide ABC transporter substrate-binding protein
MDNYSGSVPLQPNPDHLVVKQAINWLLRLRNNGANSKLQQQCDQWRAAHQEHELAWQRVQSLHQELNANLRAVPGAQVALHTLENSSQRLGRRQALKLLS GALLMGSSAWVGGDLLGWQQWTADFATAVGEQRGFQLPDGTRLELNTNSAADLDFNAQQRLIKLRHGEIMVSCGGDQDGIRRPLLVESRHALLEGFDARF VVRQEDRCTRLSVTHGSVAIHSPHTADGRTARVEAGQNYRIDHRLAEPVSPLAMDVGAWADGLIVTRNMRLDDFLLEVGRYRHGYLGCTAAIADLRLSGV FRLEDTEKLLAILPQTLPVQLRYRTRWWVTLEAVA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site