Pseudomonas sp. PH1b, U873_RS0133760

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig63, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTACGTGGGTGAAAACGCCCTGTTCGAAAAGCAGCTGCTCAGCGGCGAGATCGAAGTGGTCCTGACCCCTCAAGGCACCCTGGCGGAAAAAATGCGCGC CGGCGGCGCCGGGATCCCGGCCTTCTTCACCGCCACCGGTGTTGGCACCCCGGTGGCCGATGGCAAGGAAACCCGTGAATTCAAGGGCCGCACCTACCTG ATGGAAGAATCCATCACCGGCGACTTCGCCATCGTCAAAGGCTGGAAGGCCGATCACTTCGGCAACGTGGTCTACCGCCACACCGCGCAGAACTTCAACC CCCTGGCGGCCACCGCCGGCAAGATCACCGTGGTCGAAGTGGAAGAAATCGTCGAGCCGGGCGAACTGGACCCGACGCAGATCCACACCCCCGGCATCTA CGTCGACCGGGTCATCTGCGGCACCTTCGAGAAGCGCATCGAACAGCGCACCGTGCGCAAGTGATCGCCCTTCCCCAGCCCGACTAAAAGGACAACAAAC
DNA Sequence for Gene
>U873_RS0133760
ATGGCTCTTACCCGCGAACAAATGGCTCAGCGCGTCGCCCGCGAACTGCAGGACGGCTTCTACGTCAACCTCGGCATCGGCATCCCGACCCTGGTGGCCA ACTACATCCCCGACGGCATGGAAGTCATGCTGCAATCGGAAAACGGCCTGCTGGGCATGGGCGCCTTCCCCACCGAGGACGAAGTCGACGCCGACATGAT CAACGCCGGCAAGCAGACGGTCACCGCGCGCATCGGTGCTTCGATCTTCTCCTCTGCCGAATCCTTCGCGATGATCCGCGGCGGCCACATCGACCTCACC GTGCTCGGTGCCTTCGAAGTGGACGTGCAGGGCAACATCGCCTCGTGGATGATCCCCGGCAAGCTGGTCAAGGGCATGGGCGGCGCCATGGACCTGGTGG CCGGTGCCGAGAACATCATCGTCACCATGACCCACGCCTCGAAAGACGGCGAATCCAAATTGCTCAGCCGCTGCAGCCTGCCGCTGACCGGCGCCCAGTG CATCAAGCGCGTGCTCACCGACCTGGCCTACCTGGAGATCGAGAACGGCGCCTTCATCCTCAAGGAACGCGCCCCCGGGGTCAGCGTCGAGGAAATCGTC AGCAAGACCGCCGGCAAGCTGATCGTGCCGGACCACGTGCCTGAAATGCAGTTCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGCCCCATCATGCAAGACGTCGTCATCGTTGCCGCCACCCGCACCGCCGTGGGCAGTTTCCAAGGCTCCCTGGCAAACATTCCCGCCGTTGACCTGGG CGCCGCGGTCATTCGCCAACTGCTGGCCCAGACCGGCATCGACCCGGCCCAGGTCGACGAAGTGATCATGGGCCAGGTGCTCACCGCCGGCGCCGGGCAG AACCCCGCCCGCCAGGCCGCGATCAAGGCCGGCCTGCCCCACGCCGTGCCCGCCATGACCCTGAACAAGGTCTGCGGCTCTGGTCTCAAGGCCCTGCACC TGGGC
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MALTREQMAQRVARELQDGFYVNLGIGIPTLVANYIPDGMEVMLQSENGLLGMGAFPTEDEVDADMINAGKQTVTARIGASIFSSAESFAMIRGGHIDLT VLGAFEVDVQGNIASWMIPGKLVKGMGGAMDLVAGAENIIVTMTHASKDGESKLLSRCSLPLTGAQCIKRVLTDLAYLEIENGAFILKERAPGVSVEEIV SKTAGKLIVPDHVPEMQFA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site