Pseudomonas sp. PH1b, U873_RS0130880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTCAAGCCGGGCCAGGGGCGGCGCTTCGCGGCTGCGGTCGCGCACCTGCACACTGACCCGCAACAAGCCCGGGGCGCTGTCTGCGGCAATCGCCTGCTC ACAACGCAGCTTGAGCCGCCCCTGGTCGCAGTCGAAACTCTTCAATCCGCTGTTCCAGCGGCCCTCCAGGCGCAGTTCGGCCAAGCGGCTCTGGGCCGCC AGCAGGGCCAGGGACTTGTCCCGCAGCAGGCCGTTGCTCTGGGTCATCAGGCCGGCCACGCGCACCGCCGCCGACATCGCCACGGCAATGATGGCCAAGG CCACCAGCACCTCGATCAGGGTAAATCCAGCTTGTTTGCGCAAGGCGTGCATGGGCCGCTCGAGACCGGGAAACAGCCTCGCAGACTAGCCTGCGGGCTT GACCGAATGGCGACTGAAACTCCCGAGGTTTTTCAATATCACTGACATATGTTCTTGCAACACTGCGCGACGAATCGAACTCAAGCCAAGGAATGTCGAG
DNA Sequence for Gene
>U873_RS0130880
ATGGATATCGCGCCTGTAACATCCCTGTCCCGGGGGCCTCGGAGGCAGCGGGGCTTCACCCTGATCGAGATCATGGTGGTGGTGGTCATCCTCGGGATCC TCGCCGCCATGGTGGTGCCCAAGGTCCTCGACCGCCCGGACCAGGCCCGCGCCACTGCGGCCAAGCAGGACATTGCCGGGCTGATGCAGGCCTTGAAGCT GTACCGCCTCGACCACGGCAGCTACCCGAACCAGAACCAGGGCCTGAAGGTGCTGGTGGAGCGCCCGGCCAATGCCAAGGACAGCAACTGGCGCTCCTAT CTGGAGCGCTTGCCCAATGACCCTTGGGGCCGCCCGTATCACTACCTGAACCCGGGTGCCAACGGCGAAGTGGACGTGTTTTCCCTCGGCGCCGACGGCC AGCCCGATGGCGAAGGCGTGAACGCCGACATCGGCTCCTGGCAGCTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCAGCCATGAAAGCCCATTCGCCCAGTGCGGCGAAGCAGCGTGGCATGGCCATCATCAGCGCCTTGCTGATCGCCGCGGTGGTGGCGGTGATCGCCGG CGGCATGCTCACCCGGCAAACCTCCTTTACCCGGGCCGTGGAGGCCGAGCAAGGCCGGATCGTCGGCAGCGGGGTGCTCCAGGGCGGCCTGGAATACAGC CGGCAACTGCTCTGGACGGCGCGCCAGCGGGATGTCCTGACGCGCCTCGACCAGGCTTGGGCACGGCCCATTGGTGACCCGGCCCTGGGTGGTTTCAACA GTGCATTCCAGGGCCGCCTGCAAGACCAGCAAGGCAAGTTCAACCTGCGCAACCTGGTGTTCAATCACCAGGTGGACGCCGCGCAACTGCAGAGCTTCGA ACAGCTGTGCCAATTGATCGGCATCGACGCGGCCTTGAGCCGGCGCATCAGCCAGCGGGTGATTGCGTCCTATCCCCAGCAGTTGGGCAACCCGTCGGCC
Amino Acid Sequence
>general secretion pathway protein GspG
MDIAPVTSLSRGPRRQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIAGLMQALKLYRLDHGSYPNQNQGLKVLVERPANAKDSNWRSY LERLPNDPWGRPYHYLNPGANGEVDVFSLGADGQPDGEGVNADIGSWQL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site