Pseudomonas sp. PH1b, U873_RS0128765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGGTCAGGCCCTCTACCACCTGCAACAGCCGCTGCGGATCAGTGAATACCTCGGGCTGGCCATAGGCGTGCACGGCCACGTAGTTCCAGGTCGGTACCA CTTTTCCGTGTTCGGCCTTGCTCGGATAGAACGAGGGGCTGACATAGGCGTCCTCGCCCATGAAGATCACCAGTGCCTCGGCGCCACTGGCCAGTTCGGC ACATTGCGGATTGGCCTTGGCCAGATGCCCGTAGAGGGTGCCATTGGCCCCCTGTGCCGGGTCCAGCAACAGCGGCACATGGCTGGCCTGCAGACCCAGG GCGCCCCAGGTCACCAGGGTCGCCAGGCGGCTGTGCTGGATCACCCCGTGCAGGCGGGGCAGGTCTTCATCAACGAAAGCGCGAGGCAGATACATATAAA AAATCCTTGGCGAGTGGCTGCATCCTAGGCAGGCTAATGGTTCGTTGTAAGAGCCATCTATGATCTATTTCATGGGTCCAATCGCCCTGGGTGTACCCCG
DNA Sequence for Gene
>U873_RS0128765
ATGAACAGTGCCTTGCCTCCGCTGTCTTTCAACCCTGCCGGTATCGAACTGGATCGTCGCCAGGGCCTCAGCCGCCAGCTGTACCAGGCCTTGCGCCTGC GGGTGCTCGACGGTCGCCTGGCCAGTGGCACACGCCTGCCGGCCACTCGCGACCTGGCCGCCGCCCTGGGGATTTCCCGCAACAGCGTGGTGCGGGCCTA CGACCAGCTGTATGCCGAGGGGTTTATCGAGAGCCGGGTCGGTGATGGCACCTATGTGGCTCAACTGCCGGAAACCCGGTTGCCGCTGAAAAAACTATCC ACAAAAGTATCCACAGGGTTTTCAACAGGCTTACCCACAGGTTTATCCACAAAAAGCACGGATTTACCTGGGGTTACATCCAGTAAAGTTATCCACAGCA GTGGTGTGCAGCGGCTGCAGACGCACCATTTGAGTGCTCCGCCCAGTGGTCCACCGCGGGCTTTTCGGGTCGGCGTGCCGGCTTTCGATCTGTTTCCATT CGAGGTGTGGGCCAAGCTGAATGCGGCTTTCTGGCGCAGGCCGGACCTGCGTCAACTGTGTTACGGCGATTCGGCCGGCGATTCGCGCCTGCGCAGCCTG ATTGCCGCCTACCTGCGCAGCGCCCGGGGGCTGCACTGCACGGCTGAACAAATTGTGATCACCTGTGGTGCGCAGCAGGGCATCAGCCTTTGTGCACAGC TGCTGGTGGAGCCCGGCGACAGCGTGGCTGTGGAAAACCCCGGCTACCGCGCCGCCGGCCATGCCTTCGCCGTGGCCGGGGCGCGATTGCGGGGCGTGGC GGTGGATCAGGAGGGCATCGACTGCCGTCAGCTGGAGCAACTGGACAACTGCCGCCTGGCCTATGTCACACCGTCCCACCAGTACCCCACCGGGGTGATC ATGAGCCTGGCCCGGCGCCTGGAATTGCTGGCCTGGGCCGAGCGCAGCCAGGGCTGGATCGTCGAGGACGACTATGACGGCGAGTACCGCTACAGCGGCG CTCCGCTGGCGCCCCTGGCAGCCCTGGACCGCCAGGGGCGGGTGATCTACGTCGGCACCTTCGGCAAGGTGGCTTTTCCGGCGCTGCGCCTGGGCTACCT GGTGCTGCCGCCGAACCTGGTGCAGGCCTTTGCCCAGCGCCGGGCGGTGGATGTACGGCATTCGGAAGTCAGTACCCAGGCGGTGATGGCCGAATTCATG GCCGCCGGGCACTTCCAGCGGCATATCCGGCGCATGCGCAGGGCTGCCCTGAGCCGGCGCAATACCTTGCTGGAGGCCTGGCCGACGGTGATCGAGGGGG TAGGGCCGCTGCCCTCGGTGGCTGCCGGGCTGCACTTGACGCTGAAGGTCGACAGCCTGCAGCGAGAGCAGGAGTTGCTGGCCCAGGCCGCGAGTGTCGA TGTCGAAGTCAACGGCCTGAGCAGCTACTGGTTGCCGGACACGCCCTTGCCCGAAGACCGGCGGGCCGGGCTGGTGCTGGGGTTTGCCGCGGTGCCGGAG GCCGATATCCGCGCCGCCGTGAGCCGTTTGCGCCAGGCCTGGCGGGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGGTATACTCCCGGGCCTTCCCCTGCCCGAGACTCCTCATGAGCCAGACCCTTTCCATGGCGCCTGAACGCAAGTTCGGCGCCCCGTTGTTCGCCCTG TTGCTCCTGGTAGCCGGGGCCTTGTTCCTGCAAGCCCAGGTGGGCGCGCGGCAGGTGCTGCTGTTGCTGTTGGGGGCGGCCCTGGGATTGACCCTCTACC ACGCGGCCTTCGGCTTCACCTCGGCCTGGCGGGTGTTTATCCGCGACCGGCGCGGCGCTGGCCTGCGGGCGCAGATGGTCATGCTGGCCCTGGCGGTGCT GCTGTTCTTCCCGGCGCTGGGGGCGGGCAGCCTGTTCGGCCAGCCGGTGGTGGGCCTGGTGGCGCCGGCCGGGGTGTCGGTGATTTTCGGCGCCTTCATC TTCGGCATCGGCATGCAGCTGGGCGGCGGTTGCGCCTCGGGCACGCTGTTCACCGTTGGCGGCGGCAATGCGCGGATGCTGGTGACCCTGGGGTTCTTCA
Amino Acid Sequence
>GntR family transcriptional regulator
MNSALPPLSFNPAGIELDRRQGLSRQLYQALRLRVLDGRLASGTRLPATRDLAAALGISRNSVVRAYDQLYAEGFIESRVGDGTYVAQLPETRLPLKKLS TKVSTGFSTGLPTGLSTKSTDLPGVTSSKVIHSSGVQRLQTHHLSAPPSGPPRAFRVGVPAFDLFPFEVWAKLNAAFWRRPDLRQLCYGDSAGDSRLRSL IAAYLRSARGLHCTAEQIVITCGAQQGISLCAQLLVEPGDSVAVENPGYRAAGHAFAVAGARLRGVAVDQEGIDCRQLEQLDNCRLAYVTPSHQYPTGVI MSLARRLELLAWAERSQGWIVEDDYDGEYRYSGAPLAPLAALDRQGRVIYVGTFGKVAFPALRLGYLVLPPNLVQAFAQRRAVDVRHSEVSTQAVMAEFM AAGHFQRHIRRMRRAALSRRNTLLEAWPTVIEGVGPLPSVAAGLHLTLKVDSLQREQELLAQAASVDVEVNGLSSYWLPDTPLPEDRRAGLVLGFAAVPE ADIRAAVSRLRQAWRV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site