Pseudomonas sp. PH1b, U873_RS0128735

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGTTGAAGCTGTCGCCGACGGCTTCGGTCTTCAATACCTGGACATCGACGCGGCCTTTCATTTGCTCACGGGAGGAAATGATCGAGGCACCGTCGACGC CTTGCGCCGATTGGCGACCATCGAGCACACCTTCGCTGACGCCGCCCAAGAGGTTCTTGCCTGCCGAAATGGCTGACGAGACGGCTGACTTGGCAGAGTC CTTGAGGGTGCTTTCGCTGCCTGGCTCAGCCTCGGCCAGGCACAGCGAACTCAGGAGCAAGCCGGACAGCAGAAGCAGGGAACGCGCAGGGATGAGGGTC ATACATAATCCTTTATCGGGGTTGCTGCACCGCCACCTCAGGCGGTGAATGGCAGGCAGGTTGCACCAATCAAAGCGCCAAGTCACTAGCCACACAACCC CCGGAATGCCGCCTGCAGCAGGCCGGCAAACCACAGGTCCGAGCGCGGGCGGCATGCAACTTGCTCCGGTTAAGGGTCTTTCCCAGGCTGGAATCTGCGC
DNA Sequence for Gene
>U873_RS0128735
ATGCTGCACTCGCACCTCACCACCCTCAATGCGGTTTCACTGGTGCTCAACACCTTCAAGGAACAGGGCCAGGACGGCGACACGCTGTTGGCCGGCAGCG GTATAAACCCCGCCGACCTGAGCCGCGCCGACACTCGCATCACCACCAACCAGGAGATGCTGGTGTGCGCCAATGCCGTGGCCCTGCAACGGGACATCGG CCTGGAACTGGGCCGGCGGATGCACGTGTCCTCCTACGGCATGCTCGGCTATGCCCTGCTCACCAGTGCCACCTTAGGTGACGCTTTGCGCCTGGCGCTG CGCTATCCGGCGCTGATGGGAACACTTTTCGAACTGAGCCTGGAAACCGACGGCGCGCGCATCTGGCTGACCGCCGCCGACTACCGCGAATGCCCGGCAC TGGCGGCGTTCAACACCGAGTTCTGCCTGGTGTCGATGAAGGTCATCTGCGACGACCTGCTGGGCCACCCCTTGCCGCTGCTGGGCGCGCGCTTCGACTA CCCGGCGCCGGACTATCAACAGCACTACCGCGAACCCTTCGACTGCCCGCTGCAGTTCGACGCCCGCAGCAACGCCTTCGCCTTCGACCAGCGCTGGCTC GACCAGCCCCTGCCCCTGGCGGATGTGATCACCCATCAGGCCATGGCCGAACGCTGCCGCAAGCAGAACACCGAGTTCACCGGGCGCCAGGCCTGGCTGG GGCGTATCCGCCAGTTGCTGGCGGCGCAGCTGGACGCCGCGCCGGGGCTGGAGGGGCTGGCGGAACAGATGAACTGCTCGGCCCGGACCCTGCGCCGCCA CCTGCGGGACCTGGGTTGCAGCTATCAGGAGCTGCTGGACGAACTGCGTTTCGAACGGGCCAAGCAGATGCTCTGCGAAGACCAACTGCCCATCTACCGC ATCGCCGAGGCCCTGGGCTTCAGCGAAACCGCGAGTTTTCGCCATGCCTTCATCCGCTGGAGCGGCGTGGCGCCGAGCCAGTTCCGGCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACAAACCCCGGCACAAAGCCGCCGATTGCATTACATTGCCGACCTTTCTACCGGCAAGGGACTGCAACGTTGAACTTATCCACACGCGCCATCGCCCGA CATGTCGGCATCCGCGGGGTTTGCCTGGCGCTGGCGCTGCTGGCCGGCGCACCTGCCGCCCAGGCCTTCGACCTATGGAAGATCCGCTGGTGGGAAATGC AGCGCGACATCCTCCTGGACGATCCGGAAACCGCCACGCTGCAACTCGAACCATTCGCCATGCCCGGGCTGGCCCAGACACCGGCACGGGTGATCCTCAG CCAATACCGCGGGCTGTTCTATCTCAATGGCTACGGGGATTCGCAGTACCGACAGCGGGTCTACAAATCGCCGCCTCTGCCACTGTTCAGCACCCAGGAA CTGCAGGCCTGTGTACCAGAGCAACGCCCGGTTGAAGCCACGGACAACTGGCCGAAGAGCCACCAGCTGGAATCAGCCCTGAGTCTGAGCAAACTGAGTT
Amino Acid Sequence
>AraC family transcriptional regulator
MLHSHLTTLNAVSLVLNTFKEQGQDGDTLLAGSGINPADLSRADTRITTNQEMLVCANAVALQRDIGLELGRRMHVSSYGMLGYALLTSATLGDALRLAL RYPALMGTLFELSLETDGARIWLTAADYRECPALAAFNTEFCLVSMKVICDDLLGHPLPLLGARFDYPAPDYQQHYREPFDCPLQFDARSNAFAFDQRWL DQPLPLADVITHQAMAERCRKQNTEFTGRQAWLGRIRQLLAAQLDAAPGLEGLAEQMNCSARTLRRHLRDLGCSYQELLDELRFERAKQMLCEDQLPIYR IAEALGFSETASFRHAFIRWSGVAPSQFRP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site