Pseudomonas sp. PH1b, U873_RS0125360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PH1b Contig20, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGACTCTCACTATGGTGCCCCATGAATTTGGGTATAGCTCAGCTGGGGAAGAAGCGGCGGCTGCCAAGGCGATTCCGCCGGCCTGCACGGCCCCGCAAAG GCGGTTCCTGCACGCCTTTATATGCGGCGTACCAAGCGGCCAGGGCCAGGGGCAACTGTTCTGGCGACAAACTGCCCAGCTTCCACGCCCCGTTCAGGTC GGATGAACGGTCGTGCACAAAATGTACAAGAGCCCTCCCTGCCCCGCTCGCGAGTCAAACCGAGCAGCACGCACATAGCTTTTTTGCCGGGGAAGTCGAG GCGGTCCCGAGAACCGCTACCGCTGCCTGCAACTGCGCTCGAAACCTCGATTGAGGAGCCCTGCATCCCTCGCCCGAGAATGCTCGCCAGGATCTGCGGC GAGCGGTTTCATGCGTTGAATCAAGCCATTGGACACTGCGCGTTGGCGCGAGCCTGTGATCGTGGCAGGATGGCGAGGTTATCGACCGAGACCCCCAACC
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| DNA Sequence for Gene |
>U873_RS0125360
ATGCCCCAATCCCAAGCCAAGAATCTGTCCCTGATCGCTGCAATAGATCTGGGCTCCAACAGCTTTCACATGGTCGTGGCCAAGGCCCGGAACGGTGAGA TCCGCATTCTCGAGCGGCTGGGTGAAAAGGTTCAGCTGGCCGCCGGCATCGACGAAGAGCGTCGGCTCAATGAAGAATCCATGCAGCGCGGGCTCGACTG CCTCAAGCGCTTTGCCCAACTGATCAACGGCATGCCCCTGGGCACCGTACGCATCGTCGGCACCAACGCCCTGCGCGAAGCACGCAACCGCGGCGAATTC ATCCACCGCGCCGAGGAAATCCTCGGCCACCCGGTGGAAGTCATCTCCGGCCGCGAAGAAGCGCGCCTGATCTACCTCGGGGTTTCCCACACTCTCGCCG ACACCCCGGGCAAGCGCCTGGTGGCCGACATTGGCGGCGGCAGCACCGAATTCATCATCGGCCAGCGCTTCGAACCGCTGCTGCGCGAAAGCCTGCAGAT GGGCTGCGTGAGCTTCACCCAGCGCTATTTCCGCGACGGCAAGATCACCCCCGCCCGCTATGCCCAGGCCTACACCGCAGCGCGCCTGGAGATCATGAGC ATCGAGCACGCCCTGCACCGCCTGACCTGGGACGAAGCCATCGGCTCCTCCGGGACCATCCGCGCCATCGGCCTGGCCCTCAAGGCCGGCGGCCAGGGCA GCGGCGAAGTCAATGCCGAAGGCCTGGCCTGGCTCAAGCGCAAGCTGTTCAAGCTCGGCGATGCCGAGAAGATCGATTTCGAAGGCATCAAGCCCGACCG CCGGGCGATCTTCCCCGCCGGCCTGGCGATTCTCGAAGCCATCTTCGACGCCCTGGAACTGCAACGCATGGACCATTGTGAAGGTGCCCTGCGTGAAGGC GTGCTCTACGACCTGCTGGGCCGCCATCACCACGAAGACGTGCGTGAACGTACCCTAGGCTCGCTGATGGAGCGCTACCACGTGGACCTGGAACAGGCTT CGCGGGTCGAGGGCAAGGCCTTGCGCTCCTTCGACCAGGTGGCGGCGGACTGGGACCTGGAGGACGGTGTCTGGCGTGAGTTGCTGGGCTGGGCGGCCAA GGTCCATGAAGTGGGCCTGGACATCGCCCACTATCACTACCACAAGCATGGCGCCTACCTGATCGAACACTCCGACCTGGCCGGTTTCTCCCGGGAAGAC CAGCAGATGCTGGCCCTGCTGGTACGCGGCCATCGCCGCAACATTCCCAAGGAGAAGTTCGCCGAGTTCGGCGACGACGGCATCAAGCTGATCCGCCTCT GTGTGCTGCTGCGTTTCGCCATCCTGTTCCACCATATCCGCGGCACCCAGCAAATGCCCCAGGTGAAACTCAGCGCCAACGGCGACCAGTTGGACGTGGA ATTCCCGGCCAACTGGCTGGACGAAAACCAGCTGACCCAGGCCGACTTCGCCCTTGAAGCGGACTGGCTGACCCGGGTCGGTATCGTACTCAACGTCCGC TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTGCCCCACCGCGGATGTAGGAGCCGGCTTGCCGGCGAAGAGGCCCCCAAGCCTTGAATCACCCTTACCGGCGCTTTCGCTGGCAAGCCAGCTCCTAC AGGTCACCCACGCAAGCCAATAAAAAAGGCCAGCCCGGTGATCGGGCTGGCCTTTTTCATGGGCGCCTGTAGCGTTTAGCGCACTGGCAACACTGGGCTG CCAAGGCGCTCCAGCAAGGTCGCCTGGGCGCTGCGCGGGTTCTGGTTGCCGGTCGGCGTGTTACGGATGTAACGACCGTCGGACTGCAGGCTCCAGCTGT GGGTGTTGTCGGTGAGGTAACTCTCCAACTCCTTCTTGACCCTCAGGATCAGCTTCTTGCCCTCCACCGGGAAGCAGGTCTCGACCCGCTTGTCGAGGTT GCGCTCCATCCAGTCGGCGCTGGAAAGGAACATCTGTTCCTCGCCGCCATTGAGGAAGTAGAACACCCGGGTGTGCTCGAGGAAGCGGCCGATGATCGAG
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| Amino Acid Sequence |
>exopolyphosphatase
MPQSQAKNLSLIAAIDLGSNSFHMVVAKARNGEIRILERLGEKVQLAAGIDEERRLNEESMQRGLDCLKRFAQLINGMPLGTVRIVGTNALREARNRGEF IHRAEEILGHPVEVISGREEARLIYLGVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPLLRESLQMGCVSFTQRYFRDGKITPARYAQAYTAARLEIMS IEHALHRLTWDEAIGSSGTIRAIGLALKAGGQGSGEVNAEGLAWLKRKLFKLGDAEKIDFEGIKPDRRAIFPAGLAILEAIFDALELQRMDHCEGALREG VLYDLLGRHHHEDVRERTLGSLMERYHVDLEQASRVEGKALRSFDQVAADWDLEDGVWRELLGWAAKVHEVGLDIAHYHYHKHGAYLIEHSDLAGFSRED QQMLALLVRGHRRNIPKEKFAEFGDDGIKLIRLCVLLRFAILFHHIRGTQQMPQVKLSANGDQLDVEFPANWLDENQLTQADFALEADWLTRVGIVLNVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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