Pseudomonas sp. PH1b, U873_RS0124780

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGACCGGGGTCATCCGCATCACCCGCATGCGTGCGTAGCCCGCCCATTACAAGGAGTCATTCATGACCAAGACTGTTATCACCAGCGACAAGGCCCCA GCCGCCATCGGTACCTACTCCCAGGCGATCAAGGCCGGCAACACTGTCTACATGTCGGGCCAGATCCCTCTCGATCCAAAGACCATGGAACTGGTGGAAG GCTTCGAAGCCCAGACCGTCCAGGTGTTCGAGAACCTCAAGTCGGTGGCCGAAGCCGCTGGCGGTTCGTTCAAGGACATCGTCAAGCTGAACATCTTCCT CACCGACCTGAGCCACTTCGCCAAGGTCAACGAGATCATGGGCAAGTACTTCGAACAGCCCTACCCAGCCCGCGCCGCCATTGGCGTGGCCGCCCTGCCA AAGGGCTCGCAGGTTGAAATGGATGCCATTCTGGTCATCGAGTAACACCCGCGGCGCAGCTCTTCAGGCTGCGCCGTTTTCGTTCTGAAAGGATTTCGTC
DNA Sequence for Gene
>U873_RS0124780
ATGCGCAAAGCGCTAGCTGTTTCGCTGCTCGCCGTATTGCTCGGCGGTTGTGCCAGCGACCCCGCCAAAAACGATGTTGGCGGCATCTGGATCAATCAGG TAGCGATCGACGCAGCCTCCAAAGGTGGCCCTTTGCGTGAAGCCCTCCAGGCTTACGGCCCGAACCTGGAGTGGGAACTCAACACCAAGGCTGGCCAGGC CCGCTACACCAATGGCTTCGAAACCGTCGAAGGCAAGATCATCGGCGACGGCGCAAGCCCGGCCAAGGTCGAGTTCTATGGCAGCGCCGCCACTGAACTC AAGCGCAACGGCAAGCAACTGCTGCAAGTGGCCAACGACAACGAACCCGAACAGGTCTTTGACCGGCCCAAGGAGCCCGCTCCCGAAGGTGCGCCACTGG GTGCCAACTTCGAGCGCGCCTTGTACTCGGCCTACCTGGGGGGCAAGTGGAAGATCGTCAACGGCCCAGGCCTTGGCAACGAAGTGCAGTTCCAGGCAAA CGGTGCGGTCCAGGGCCTGCCCGGGGCTGATCGCTACGCCTTGTGCCTGGCTGGCGACTGCGCCTCCATGAGCGGCGGCAACGACAGCATCTGGCTGCAG CTCAATGGCCAGGGCAACTCATGGATCTTTGTGCGCAAGGATCAACAGCTGGAAATTTTCCAGGCAGTGAATACCGCCCTGGCCGACGAAGTACCTTCGT TGACCCCGGGCAGCCAGCAGTGGTTGCTGGAAAAGCGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTCCCGCAGCTACCGCATGCGGCAGCTGCGAACGGGCCGGCGAGTCAGCCCTGCCCTTCGAGAATCGCCGCATAACCCTCGCGATAACTCAGGTAGCG CGGCACCCAACCCAGTGCTCGCGCCCTGGCATTGCTGCAACGCTTGCTGCCCGTGCGACGAACGCTGGCATCTGCCGCCCACTCGGTCACCCCCAGGTAT TCACGCAACCAGCCGACCACCTCGGCCAACGGCGCAGGCGAATCGTCGACGCCTATGTAGCAGTCATCCAATGCCGCACCACGCTGGTCGGCCTTGAGCA GAAACGCCAGCAGGCCTGCTGCATCGTCAGCGTGAATCCGGTTGCCGTACAGCGGCGGATCGGTCTCCACCCGATAGCCTCGCCGCACCTGAGTCAGTAG CCACTCACGGCCCGGACCGTAGATACCGGTAAGACGCACCCGGCTGGCGGGAATCCCGCTGTCCAGGGCCAACTGCTCCGCTTCCAGCATGACGCGACCT
Amino Acid Sequence
>hypothetical protein
MRKALAVSLLAVLLGGCASDPAKNDVGGIWINQVAIDAASKGGPLREALQAYGPNLEWELNTKAGQARYTNGFETVEGKIIGDGASPAKVEFYGSAATEL KRNGKQLLQVANDNEPEQVFDRPKEPAPEGAPLGANFERALYSAYLGGKWKIVNGPGLGNEVQFQANGAVQGLPGADRYALCLAGDCASMSGGNDSIWLQ LNGQGNSWIFVRKDQQLEIFQAVNTALADEVPSLTPGSQQWLLEKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site