Pseudomonas sp. PH1b, U873_RS0122685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCAATCCGGCAGACCAGCACTCGTTCATCGTCACCGAGGAGCTGGCTCCTACCGTCAGCCTTGAAGACTTCAGCATCGACTGGGTCAAGCAACCGCCGC TGCCTGCGCTCAAGCGAGCGCTGATTGCCGAAGTGGCCCGCATGACCGGGATGATGCACCGCGCCGGGGTCAACCATCGCGACTGCTACATCTGCCACTT CCTGCTGCACACCGACCGGCCGATCACCCCTGCGGGGCTCAAGCTCTCGGTGATCGACCTGCATCGGGCCCAGACCCGGCCGAAGATCACCCAGCGCTGG CGCAACAAGGATCTGGCCGCGCTGTATTTCTCGGCCCTGGACATAGGCCTGACGCGTCGCGACAAGCTGCGTTTTCTCAAGGGCTACTTCCAGCAACCGT TGCGCCAGATCCTGGCCGAAGAGGCTGCGCTGCTGTCCTGGCTGGAAGGCAAGGCGGAAAAGCTCTACGCACGTAAACAACGGTACGGAGACGCGCTCTG
DNA Sequence for Gene
>U873_RS0122685
ATGGCGAGCTGGAACCTGGATCCTGCTTATCAGGCATTGGCGCACGATTTTGGCAGTCTGCAAGCGGTGTTTGAACTTGAGGGCGAGCGCCTGACCCGTG ATCCGTTGTCCGAGGTGGTTCGCGTCGAGCGTGATGGGGTCAACTACTACGTCAAGCGCTACACCGGCGCCGGCAAGAACCTGCGGCGCTACCTGGGCAA GCCTCGGGTCAAGTTCGAGTGGCAGAACCTCAAGCGCTTCGCCAAATGGGGCATCCCCACCGCCGATGTGGTGGCCTGGGGCCTGGAGCGGCGTGGCCTG GCCTACTCCCGTGGGGCGATGATTACCCGCGAACTGCCGCGCACCGAAGACTTGTCGGTGCTGGCCGAGCGCGACGATCCGAAGCTCAAGGACCGGCGCT GGGTCGATGGGGTCAGCCGGCAGTTGGCCAGCTACACCCGCATCATGCACGACCATCGTTTTACCCATAACGATTTGAAGTGGCGCAACCTGCTGGTCGA CGATCAGGACCGGCTGTACCTGATTGACTGCCCGAACGGTGATTTCTGGCGTGGATTCTGGCTCAAATACCGGATCACCAAGGACCTGGCCTGCCTGGAC AAGGTGGCCAAGTATCATCTGTCGGCGACTCAGCGCCTGCGCTTCTATCTGCAATACCGCCAGCGTGACCGTCTGAGCGCTGCCGACAAGGAGCGTATTC GTCACGTGGTGAGATTTTTCGAGGGGCGCGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGATTTCCTGGCGTCCGAGGAACGAGCGCTGCTGGAGCGCCACGGCCTTGGCACTTTTGACCAGTTGTGGGCGGCGAAGCTGCATGCGGTGGACGAACC CAATACCAGCCGCGGTGGCTACAGCACGGTCTTTCGCCTGGATCTGGAAGGGCAGGGGTTCTATCTCAAGCGCCAGAGCAACTACCTGACCCGGACCCTG CACCGGCCTTTTGGCGAGCCGAGTTTCGCTCGCGAATTCCGCAATATCCGCCGCTATCAGCAGATGGGCATTCCGGCGTTGCAGGCGGTGTTCTTCGGGA TGCGCAAGGTGGCCGGAGAGTCCCGGGCGATTCTTTTGACGCGAGCGCTGGATGGCTGGGACGATCTGGACGCTCTGTTGCTGCGCTGGGAACAGCTCGA CGAGGCGCAGCGCCAGGCGGTGCTCAAGGCCTGCGGCCTGCTGGCCCGGCAACTGCACGGCCTGCGGCAGGTGCATGGCTGTTTCTATCCCAAGCATATT
Amino Acid Sequence
>heptose kinase
MASWNLDPAYQALAHDFGSLQAVFELEGERLTRDPLSEVVRVERDGVNYYVKRYTGAGKNLRRYLGKPRVKFEWQNLKRFAKWGIPTADVVAWGLERRGL AYSRGAMITRELPRTEDLSVLAERDDPKLKDRRWVDGVSRQLASYTRIMHDHRFTHNDLKWRNLLVDDQDRLYLIDCPNGDFWRGFWLKYRITKDLACLD KVAKYHLSATQRLRFYLQYRQRDRLSAADKERIRHVVRFFEGRE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site