Strain | Pseudomonas putida S16 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCAAGCGAAGAAGAAGAGTCTGTCGGCCTCGACCTGGCTCAGCACAACGAGCGCGGCTACAACCTGTAACCGCGACGCGGTAAAAACTTGCCCGGCTTG CCGGGCATTTTTTTTGCCAGATTTTTAGCATTTCCCGCACGGCAAACGGTTTATCCGACACGTTCGCGACGTAGGCGGAAATCTTACAAAACGCAGAGCA TTCATGGTGCTTTGCTTTTTCTGCTGGCGCGCTAGAATGCGCGCCGAAGGGTGTTTGACGAGGAGTCCACACGCTTCGCCAGCCTTTGCTAGGCTTGCCA ATAGCGTGTGGCCAGCAGGGGCTAAAGGATTTGTCAGGTCCTGCCAGGAGCAGGGTCTGCTGGGTGCCGCCTCCCATCAGGAGCGCCGACCCTAGGGCAG TGGCCTAACCCACGGCCAGTTGAATTTTCACTGGTGGCTGCCGGTCTACGGCTGCACTGGTCTATAACTAACCTGCTTTTCGCAAGTCATGAGGTAGAAC
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DNA Sequence for Gene |
>PPS_5086
ATGAGCGACGACGATCTGGAAAATGATGACCTCGAAGTAGGCGACGAAGACGAGGGCGATGAAGGCCTCGAAGCGGCAGCTGATGATGGTGCCGAAGACG CTGGCGATGACGACAGCAGCCCGGCACCCGCTGCCAAGGGCAAATCCAAAGCCGCGGTCTCGGTAGACGAGATGCCGAGCATGGAAGCCAAGCAGAAGGA GCGTGACGCCCTGGCCAAGGCCATGGAAGAGTTCCTCGCCCGCGGCGGAAAGGTTCAGGAAGTCGAGGCCAACGTGGTCGCCGATCCGCCCAAGAAGCCG GACAACAAGTACGGCAGCCGCCCTATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGGCTGATCGAAAAAAAGCCCGCCGTCGCTGCGGGCTTTTTTGTGCCTGTCTGTTTTGTGTTGCCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCG CTGGGATCGCGCAGAAGCTGAGAGGGCAGTAAACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCCGCGAAGCGGCGCCTGTCAGCGCCAGCGCGCGAGGA TGTCGGGTAACTGCGACAGGCGCTGGATCTCGGCGTCCGGCGCCTGTTCGCCTACCCACGCCTTGCCCTGGGGGTTGAACCACACCGCCCGCAGCCCGGC GCGCTGGGCGCCGGCAATGTCATCGCCCGGGTGGTCACCGATGTGCACCGCTGCGCTGGCCTCCACGTCACCGCGGCGCAGGGCTTCGAGGAACGGCGCC GGGTCCGGCTTGCCGATGCCGAGGTCTTCGGCACACAGGGCAAAGCGGAAATAGTCCGCCAGCCCCAGCCGGCTTACGTCGGCATTGCCGTTGGTGACCA
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Amino Acid Sequence |
>hypothetical protein
MSDDDLENDDLEVGDEDEGDEGLEAAADDGAEDAGDDDSSPAPAAKGKSKAAVSVDEMPSMEAKQKERDALAKAMEEFLARGGKVQEVEANVVADPPKKP DNKYGSRPI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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