Pseudomonas putida S16, PPS_5053
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S16 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AACTGCACGGCCTGCTGATCGGCCGCAGCTGCGCCGGTGCCGGCTTCGACGCCGACGGCTGGCTGGCCGATGCCGCCCAGCTGCTGGAAACCGAGCCCGG TGACACCGTACGCAACGCCCTGGTCGGCCTGCAGGAAATGGTCAAGGGCGAACTGACCAGCGACGAAATGGCGATCGTCCTGCTGCTGCCTTCCGACGAC GCCGCCCTGAGCGATCGCGCCACCGCGCTGGGCCAGTGGTGCCAGGGCTTCATCACCGGTTTCGGCCTGAATGCCGGTGGCAAGGACTTGTCCGACGAGG CCAAGGAAGTGCTGCAGGACCTGGTGGCCATTTCCCAGGTCCAGGAAGCCCTCGAGGAGTCCGAGGATGGCGAGAGCGATTACATGGAAGTCATGGAATA CCTGCGTGTGGCGCCGTTGCTGCTGTTCTCCGAGCTGGCCAAGCCGGCCGCCCCTGCACCCAAGCCATCGCTGCACTGATCAACCAGGGGTAGTCTGCCC
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| DNA Sequence for Gene |
>PPS_5053
ATGAGCCACATTCCCAAGGCCGAGTATGCCCGTCGGCGCAAGGCGCTGATGGCGCAGATGGTCCCCAACAGCATAGCCATCCTGCCCGCCGCCGCGGTTG CCATCCGTAACCGCGACGTCGAGCACGTTTACCGCCAGGACAGCGACTTCCAGTACCTCAGTGGTTTCCCCGAGCCGGAAGCGGTGATTGCGCTGATTCC CGGTCGCGAGCATGGCGAATACGTGCTGTTCTGCCGTGAACGCAACCCCGAGCGCGAGCTGTGGGATGGTCTGCGGGCCGGTCAGGAAGGTGCGGTGTGC GATTTTGGCGCAGACGATGCCTTCCCCATCACCGACATCGACGAGATCCTGCCGGGCCTGATCGAAGGCCGTGAGCGGGTATACAGCGCCATGGGCAGCA ACCCCGAGTTCGACCGCCGGCTGATGGACTGGATCAACGTGATCCGCTCCAAGGCCCGCCTGGGTGCCCAGCCGCCGAACGAGTTCGTTGCGCTGGATCA TCTGCTGCACGACATGCGTCTGTATAAATCGGCAGCGGAAGTGAAGGTGATGCGCGCTGCCGCAGACATCTCGGCGCGGGCCCACGTGCGAGCCATGCAG GCCTGCCGGGCCGGGTTGCACGAATACAGCCTGGAAGCCGAGCTGGACTACGAATTCCGCAAGGGCGGGGCGAAGATGCCGGCCTACGGCTCGATCGTCG CGGCCGGGCGCAATGGCTGCATCCTGCACTATCAGCAGAACGACGCCCCGCTCAAGGATGGTGACCTGGTGTTGATCGATGCCGGCTGCGAGATCGACTG CTACGCCAGCGACATCACCCGTACCTTCCCGGTCAGCGGGCGTTTTTCGCCCGAGCAGAGGGCCATCTACGAGCTGGTGCTCAAGGCCCAGGCAGCGGCG TTTGCCGAAATCGCCCCTGGCAAGCACTGGAACCACGCCCATGAGGCGACCGTGCGGGTCATTACCGAGGGCCTGGTGGAACTGGGCCTGCTGACGGGCG AGGTACAGGCGCTGATCGACAGCGAGGCCTATCGTGCCTTCTACATGCACCGCGCCGGGCACTGGCTGGGCATGGATGTGCACGATGTGGGCGAGTACAA GGTGGGCGGCGAGTGGCGGGTGCTCGAACCCGGCATGGCGCTGACCGTCGAGCCGGGCATCTACATAGGCGCCGACAATCAGGCCGTGGCCAAGAAATGG CGCGGCATTGGTGTAAGGATCGAGGACGACGTGGTAGTGACCAGGCAAGGCTGTGAAATCCTGACTTCGGGCGTGCCGCGCACGGTCGCCGAGATCGAGG CGCTGATGCAGGCCGCCCGCAAGGACGCGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATCGGGTAAACCTGGCGATCATCGGTGGCGGCCTGGTGGGCGCGAGCCTGGCCCTGGCCCTGCAGGCGGGGGCCAAGGCGAGAGGTTGGAAGATCCTGCT GATCGAGCCGTTCGCCCCCGGTGACAGCTTCCAGCCCAGCTACGACGCGCGTTCGTCGGCACTGTCGTTCGGTACCCAGCAGATCTACCAGCAGCTGGGC CTGTGGCAGGCCATCGGCCATCGCGCCGAACCGATCTTGCAGATTCACGTGTCCGACCGCGGCCGTTTCGGTGCCACCCGCCTGGATGCCCGGGAAGAGG GTGTGCCGGCGCTTGGCTACGTGGTGGAAAACGCCTGGCTGGGCCAGTGCCTTTGGCAAGGGCTGGACAGCGAGGTGGTGAGCTGGCGCTGCCCGGCGGA AGTGACTGCGATGCAGGCCATCGAAGGTGGTTACCGCCTGCAGCTGAACGATGACACCCAGTTGGAGTGCGACCTGTCTGTACTGGCCGACGGTGGCCGT
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| Amino Acid Sequence |
>peptidase M24
MSHIPKAEYARRRKALMAQMVPNSIAILPAAAVAIRNRDVEHVYRQDSDFQYLSGFPEPEAVIALIPGREHGEYVLFCRERNPERELWDGLRAGQEGAVC DFGADDAFPITDIDEILPGLIEGRERVYSAMGSNPEFDRRLMDWINVIRSKARLGAQPPNEFVALDHLLHDMRLYKSAAEVKVMRAAADISARAHVRAMQ ACRAGLHEYSLEAELDYEFRKGGAKMPAYGSIVAAGRNGCILHYQQNDAPLKDGDLVLIDAGCEIDCYASDITRTFPVSGRFSPEQRAIYELVLKAQAAA FAEIAPGKHWNHAHEATVRVITEGLVELGLLTGEVQALIDSEAYRAFYMHRAGHWLGMDVHDVGEYKVGGEWRVLEPGMALTVEPGIYIGADNQAVAKKW RGIGVRIEDDVVVTRQGCEILTSGVPRTVAEIEALMQAARKDAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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