Pseudomonas sp. PH1b, U873_RS0118410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCTGGTACTTCCTGGTACCGGACCTGCTGCCGGAAAACATTCAGGAGTGGTACAAGCAGGACCTCAACCCGACCACCTCGGCCTACCTGAGCGTGGTGG TGTGCCTGGGCCTGTTCACCGCTGCGCGGGTCTGCGAACAGGTACGCACCGGTATCCAAGCCCTGCCCCGTGGCCAGGAATCCGCCGCACGCGCCATGGG CTTCTCGCTGCCGCAGATCTACTGGAACGTGCTGCTGCCCCAGGCCTACCGGATCATCATTCCGCCGCTCACCTCGGAATTCCTCAACGTCTTCAAGAAC TCCTCCGTGGCCTCGCTGATCGGCCTGATGGAGTTGCTGGCCCAGACCAAGCAGACCGCCGAGTTCTCGGCCAACCTGTTCGAAGCCTTCACCCTGGCCA CCCTGATCTACTTCACGCTGAACATGAGCCTGATGCTGCTGATGCGCCTGGTAGAGAAAAAAGTGTCGGTCCCCGGCCTGATCTCCGTGGGGGGTAAATA
DNA Sequence for Gene
>U873_RS0118410
ATGGAATTCGACTTCTCGGGCATCATCCCGGCCATTCCCGGCCTGTGGAACGGCATGCTGATGACCCTCAAGCTGATGGTCATGGGCGTGGTCGGCGGGA TCATCCTCGGCACCTTGCTGGCCTTGATGCGCTTGTCTCACAACAAGCTGCTGTCGAACCTGGCGGGCGCCTACGTCAACTACTTCCGCTCGATTCCGCT GCTGCTGGTGATCACCTGGTTCTACCTGGCGGTGCCGTTCGTGCTGCGCTGGATCACCGGCGAAGACACCCCGATCGGCGCATTCACCTCGTGCATCGTG GCCTTCATGATGTTCGAAGCGGCGTACTTCTGCGAAATCGTCCGCGCCGGCGTGCAGTCCATTCCCAAGGGCCAGATGGGCGCCGCCCAGGCACTGGGCA TGAGCTACGGCCAGACCATGCGCCTGATCATCCTGCCCCAGGCGTTCCGCAAGATGACCCCGCTGCTGCTGCAGCAGAGCATCATCCTGTTCCAGGACAC CTCCCTGGTGTACACCGTGGGCCTGGTGGACTTCCTCAACGCCTCGCGTTCCAGCGGCGACATCATCGGCCGCTCCAATGAATTCCTGATCGTTGCCGGT CTGGTGTATTTCACAATCAGCTTTGCCGCCTCGCTGCTGGTCAAGCGTCTGCAAAAAAGGTTCGCCGTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTCTATCAAGAACATCAACAAGTGGTATGGGGACTTCCAGGTGCTGACCGATTGCAGCACCGAGGTCAAGAAAGGTGAAGTGGTGGTGGTCTGCGGGCC GTCCGGCTCGGGCAAATCCACCCTGATCAAGTGCGTCAACGCCCTGGAGCCCTTCCAGAAGGGCGACATCGTGGTGGACGGCACCTCCATCGCCGATCCG AAGACCAACCTGCCGAAACTGCGCTCGCGAGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTTCCGCACCTGACCATCACCGAGAACCTGACCATCGCGC AGATCAAGGTGCTGGGCCGCAGCAAGGAAGAAGCCACCAAGAAGGGCCTGCAACTGCTGGACCGGGTCGGCCTCGCCGCCCACGCCCACAAGCACCCGGG GCAACTCTCCGGTGGCCAGCAGCAACGTGTGGCCATCGCCCGCGCCCTGGCCATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGGCCCTGGAC
Amino Acid Sequence
>amino acid ABC transporter permease
MEFDFSGIIPAIPGLWNGMLMTLKLMVMGVVGGIILGTLLALMRLSHNKLLSNLAGAYVNYFRSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFTSCIV AFMMFEAAYFCEIVRAGVQSIPKGQMGAAQALGMSYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRSNEFLIVAG LVYFTISFAASLLVKRLQKRFAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site