Pseudomonas sp. PH1b, U873_RS0115450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCGCAACTGCCAGTGGGCTATACCGATGATCCTTTCGAGGCACTGGAGTTGCAGGACGAACTGCAATGCAAGTACACCGGCGGCACGGTGCTGCACCTG TACATGGCCGAGCGGATCTCCTCGGCCCGGGCCTGCAAGCAACTGGTGCGCAAGGCCCTGGGGCGGTTTCGGCTGCCTTACCTGACCGTCACCCCGACTT TTTCCATCTGCCCGGTGCACGGCTACCTGGAGGGCGAGCATGAGTTCTGCCCCAAATGCGACGAGGCCCTGTTGCTGGCGCACGCGTCGGGCCACGTCGA TTGATTTCGATCCACTCAACCGCAAGGAGCTCCACCATGACTGCACTGCAAACCCTGCCTGTGGCGCAACGCCAGCGCTGCGAAGTCTGGACCCGGGTGA TGGGCTATCACCGCCCGGTGTCGGCGTTCAACCCTGGTAAACAGTCCGAGCACCACGAGCGGCGGCACTTCCAGGAGGGAGCCGCCACGGCCGGCCACTC
DNA Sequence for Gene
>U873_RS0115450
GTGAGTCGAACACTGCGGGTCGGGGGCCTGGTGCCCCTGACCACCCTTGATTACCCAGGCAGGCTGGCGTGCGTGGTGTTTTGTCAGGGGTGCGCTTGGC GCTGCCGTTACTGTCACAACCCTCTATTGATTCCCCCACGCGGTCGCCAGGAACTGGAATGGGAGCAGGTCCTGGCATTCCTCCAGCGGCGCCAGGGCCT CCTCGAAGCAGTGGTTTTCAGTGGTGGTGAAGCGACCCTGCAGGCCTGCCTGCCGGATGCCATGGCGCAGGTCCGAGCGCTGGGCTTCAAGGTTGGCCTG CACAGCGCCGGGATCAACCCGGCGGCTTTTGCCCGGGCCCTGCCGGGTGCCGACTGGATCGGTTTCGACGTCAAGGCCCTGGCCGAGGACTGCGCGAACA TCACCGGCGTGCGCGGCAGCGGCATGGCCAACTGGCACAGCCTGGACCTGCTGCTGGCCAGCGGCATCGCCTATGAGTGCCGCACCACGGTGCATTGGCA TTTGCTTGAGCCATCAGGTTTGTTGAGCCTGGCCCGGCGTTTGAATGAGCGCGGGGTCACGCGGTTCGTGGTACAGCGGGTGCGCACGGCCGACATGTTG GACCCGAGTCTGTCGAAGGCGCCGGCGCCGCCCCCGTTGCCCGCGTTGTGGGAGGCCCTGGGGCAACTGTTTCCCGCGTTCGAGGTGCGGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCCATGACGGCCTGTCAAGGCTACGGGTGGTTGTTTCTACACAGGCGGGGCACAGGGCCCGGCCGCGATCCGGATTGAGCAGGTAGAGCCGGCAGTGC TGCTCGCCAGGGAAACACCTTGAGCGTCATCGCTCGGTTTGCCCAAGGGCGGTTCCGGCAAGCATGGCTGGGCTGGTGCTCGCGGTGCATCGGCGGCGCC ATTGCCGGCCAGGTGGTGGGAAAGCTACATTGGCGCCACTGCCTGTTCTCCACGATCGCCGGAGCCTCCCTGTAATGGCCACTTCCACGTTGTTCCTTTA TGTCGTTGCGGTAAGCGCGGTGATGATGACGCCTGGTCCGTCGATGCTCCTGGCACTGAGCAATGGTGCGGGCCACGGGATGCGGGTGGCGTCGTTCGGC ATCGCCGGGGCGGCGTTGTCGGACCTGCTGCTGATCGCTGCCGTCGGTTGTGGCCTGGGGGCGTTGTTGCAGGCCTCCGAGCAACTGTTCTCAGTGGTGA
Amino Acid Sequence
>radical SAM protein
MSRTLRVGGLVPLTTLDYPGRLACVVFCQGCAWRCRYCHNPLLIPPRGRQELEWEQVLAFLQRRQGLLEAVVFSGGEATLQACLPDAMAQVRALGFKVGL HSAGINPAAFARALPGADWIGFDVKALAEDCANITGVRGSGMANWHSLDLLLASGIAYECRTTVHWHLLEPSGLLSLARRLNERGVTRFVVQRVRTADML DPSLSKAPAPPPLPALWEALGQLFPAFEVRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site