Pseudomonas sp. PH1b, U873_RS0111745

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCCCAAGGTGTTTGGCGACGAGCGCGGTTTTTTCTACGAAAGCTTCAATGCCAAGGCATTTGCCGAAGCCACGGGCCTCGATACTCAATTCGTCCAAG ACAACCACTCACGCTCGCAGCAGGGCGTGCTGCGCGGGCTGCACTACCAGTTGCAGAACACCCAGGGAAAACTGGTGCGCGTGACCCAGGGCGAAGTACT CGACGTGGCCGTGGACATCCGTCGCAGCTCGCCGCACTTCGGCCAGTGGGTGGCGGTGCGCCTGTCGGCCCAGAATCATCGCCAGCTCTGGGTTCCCGAA GGCTTCGCCCATGGTTTCGTGGTGCTCAGCGACTTCGCCGAGTTCCTCTACAAGACCACCGACTACTACACTCCCTCTGCCGAGCGCTGTATCCGTTGGG ACGATCCGACACTCGCCATCGACTGGGAGCTCAGCGCCCCCCCGCAACTGTCCGCCAAGGATCAGGCAGGAACCCTGCTGACTGAGGCCGACCTGTTCCC
DNA Sequence for Gene
>U873_RS0111745
ATGAGCACTCCCCTGAAAATCCTGATCAGCGGCCAGCACGGCCAGGTGTCCCGCGAGCTGCAACAGCGCCTCGGCGATTTGGGCCAACTGGTGGTCCTGG GCCGTGACCAACTGGACCTGACTCACCCGGAGCAGATTCGCCAGCAGGTCCGGGCGATCCGTCCCGACCTGATCATCAACGCCGCCGCCCACACCGCCGT CGACCAGGCCCAGAGCGAAGCGGACCTGGCCTTCGCGATCAACGCCACCGCCCCCGGAATCTTCGCCCAGGAGGCCCAGGCACTGGGCGTCCCGCTGATT CACTACTCCACCGACTACGTGTTCGATGGCAGCAAGGACGCGCCCTACGTGGAAGACGACGAGCCCAATCCGCTGAGTGTCTATGGCGAGAGCAAGCTGG CCGGCGAGAGGGCGATCAATCTGGTCCAGGGCCAGCACCTGATCCTGCGCACCAGCTGGGTCTATTCCAGCCACGGCAAGAACTTCCTGCTGACCATGCA ACGCCTGCTGCAGGAAAAACCGGAGCTGCGCATCGTCGCCGACCAGATCGGTGCTCCGACCTGGGCCGGTACCATCGCCAACAGCACCCGCGCCCTGATC GAACGCTGGCAGGCCGGCAACCCCGGAGCCTGGGGCACCTACCACCTCACCGCCCATGGCGAGACGTCCTGGTTCGGCTTCGCCCAGGCCATCGGCGAGC AGCTGCTGGCCATGGGCAAACCCTGCGCGGTACTGGAAGCCATCCCCTCCAGCGCCTACCCGACACCGGCACCCCGGCCACTGAACTCGCGGCTGGACTG CAGTCGGCTGGCGCAGCAGTGGGGAGTGATCCAACCGGACTGGCACACCGCATTGCGCGAGTGTCTTGCCGAGCAGGGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATAATGCGCCTGTATCCACAGGCGCCCTTCCCATGACTGCACCCCTTCCCCGTCGTCCCCGCTGGCGCAGCCTGGCGCTACTGGCCCTGTGCCTGGCG CCGTTGCTGTGGCCACTGGAGCACCTGGCCGAACGCTATTACCGCAACGAACTGGCCAGCCAGAATCGCCAGACCCTCGACCTCTACGTGGCCAACCTGC TGGGCACCCTGCACCGCTACGAAGTGCTGCCGCAGATTCTCGGCGACCTGCCGGCACTGCGCTCGGTACTGGGCGCACCGGACGATAGCGTGACCCAAGG CAATGCCAATCGCCTGCTGAAAAACATCAGTGCCCAGACCGGGGCCGAGGTCATGTACCTGATGGACACCCGGGGCAACACCCTGGCAGCGTCCAACTGG GACAAGCACGACAGTTTCGTCGGGCGCAATTTCGCCTTTCGTCCCTACTTCAGCGAAGCCATGGCCGGACGCCTCGGGCGCTTCTTCGGCCTGGGCACCA
Amino Acid Sequence
>dTDP-4-dehydrorhamnose reductase
MSTPLKILISGQHGQVSRELQQRLGDLGQLVVLGRDQLDLTHPEQIRQQVRAIRPDLIINAAAHTAVDQAQSEADLAFAINATAPGIFAQEAQALGVPLI HYSTDYVFDGSKDAPYVEDDEPNPLSVYGESKLAGERAINLVQGQHLILRTSWVYSSHGKNFLLTMQRLLQEKPELRIVADQIGAPTWAGTIANSTRALI ERWQAGNPGAWGTYHLTAHGETSWFGFAQAIGEQLLAMGKPCAVLEAIPSSAYPTPAPRPLNSRLDCSRLAQQWGVIQPDWHTALRECLAEQG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site