Pseudomonas sp. PH1b, U873_RS0111730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCGCAGCCCGGGGAGCTGTTGCAGATGCTTGAGGCCGGCGTGCTGCGCCTGCAGTTCCAGGGCGGCGTAGTCGCCGCGGCAGATTTTCAGGACAAAGC GGCCTTGCGGGCTGTCGACGCGGTAGTTGAGGTCCTGCTGGCTGCCCAGGGTCTGCAAGGTGCCGTGCAGGCCGTAATGGGTTTGCAGCAGTTCCAGCGC TTGCTGTGCAGTCACTCGCGGGCTGGGCAGGCTGGCGCGGTGGATCAAAGTGGCGAGCAACATACAACGTCCCCTGGAATTATTGTCAGCCGCTTATATC GCCACTGCCCAAGGCGTTGCGCAACCCCCAAAAACGCTGAACGCACGATGCCCCTGACGGTCGCATGCCTGGTTTTGATCGGATTTCGCCCGCCCGGAAT GCAATCGGTGGGCTGCGCCTATTGCGCCACAGGCGTTGTGTCGACAAGCTATGCTGCATTTCCGCAGCACATGATCTTTTAAGGATACAGGCCACTTCAC
DNA Sequence for Gene
>U873_RS0111730
ATGCGCATTCTCATCACCGGCGGAGCCGGTTTTATCGGTTCGGCCCTGATCCGCCACCTGATTCAGCACACGGAACACGAAGTGCTGAATCTGGACAAAT TGACCTACGCCGGCAACCTGGAGTCGCTTGAGAGCATCGCCAGCAACAGCCGCTACGAATTCGTCAAGGCGGATATCGTCGACCAGGCCACCGTCAGCGC TGTGCTATCACGCTTCCAGCCCCACGCGATCATGCACCTGGCGGCCGAATCCCATGTCGACCGCTCCATCGACGGTCCCTCGGATTTCATCCAGACCAAT ATCGTCGGGACCTACAGCATGCTGGAAGCGACACGCGCCTACTGGCAGCAGTTGCCCGAAGCGGAAAGAACCGCCTTCCGTTTCCACCATATTTCCACCG ATGAGGTCTACGGCGACCTGCATGGCGTCGATGACCTGTTCACCGAAACCACGCCCTACGCCCCCAGCTCGCCCTACTCCGCCAGCAAGGCCGCGTCCGA CCACCTGGTCCGCGCCTGGCAGCGTACCTATGGCCTGCCGGTGCTGATCACCAACTGCTCCAACAACTACGGCCCGTTCCACTTCCCCGAGAAGCTGATT CCACTGGTGATCCTCAATGCCCTGGCAGGCAAGCCACTGCCGGTCTATGGCAATGGCCTGCAAGTGCGTGACTGGCTGTATGTCGAAGATCACGCCCGGG CTCTGTTCAAGGTAGTGACCGAAGGCGTGGTGGGCGAGACCTACAACATCGGCGGCCACAACGAACAGAAGAACATCGACGTGGTGCGTGGCATCTGCAG CCTGCTGGAAGAGCTGGCCCCGGAAAAACCCCAGGGCCTGGCCCACTACGCCGACCTGATCACCTTCGTTCAGGACCGTCCCGGCCACGATCTGCGCTAC GCCATCGACGCCAGCAAGATCGAGCGCGAACTGGGCTGGGTCCCGGAAGAAACCTTCAACAGTGGCCTGCGCAAGACCGTGCAGTGGTACCTGGACAACC TCGAGTGGTGCCGCCGGGTACAGGACGGCAGTTATCAGGGCGAACGCCTGGGCTCCACCGACATCAAGGATCTGATTGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAGGGCATTGTTCTGGCCGGCGGGTCCGGTACCCGCCTGCACCCCATCACCCTCGGCGTTTCCAAGCAGCTATTGCCGATCTACGACAAACCAATGAT CTACTACCCGATCTCGGTGCTGATGCTGGCCGGCATCCAGGACATCCTGATCATTTCCACCCCCCATGACCTGCCGCAATACCGCAACCTGCTGGGTGAC GGCAGCCAGTTCGGCGTGCGTTTCAGCTATGCCGAGCAGCCGTCGCCGGATGGACTGGCCCAGGCCTTCCTGATCGGCGAGGCGTTCATCGGCAATGATC CGGTGTGCCTGATCCTCGGCGACAACATCTTCCACGGCCAGTACTTCGGCGAACAACTGCGCAATGCGGCCCAGCGTCCTAGCGGCGCCACCGTATTCGG CTATTGGGTCAAGGACCCGGAGCGTTTCGGGGTCATCGACTTCGACAGCGAGGGCCGCGCCCTGTCCATCGAAGAGAAACCCGAGCAGCCGAAATCCAGC
Amino Acid Sequence
>dTDP-glucose 4,6-dehydratase
MRILITGGAGFIGSALIRHLIQHTEHEVLNLDKLTYAGNLESLESIASNSRYEFVKADIVDQATVSAVLSRFQPHAIMHLAAESHVDRSIDGPSDFIQTN IVGTYSMLEATRAYWQQLPEAERTAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLPVLITNCSNNYGPFHFPEKLI PLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALFKVVTEGVVGETYNIGGHNEQKNIDVVRGICSLLEELAPEKPQGLAHYADLITFVQDRPGHDLRY AIDASKIERELGWVPEETFNSGLRKTVQWYLDNLEWCRRVQDGSYQGERLGSTDIKDLIA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site