Pseudomonas putida S16, PPS_4835
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S16 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTAGCCCAAGTGATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCGCGCACGATCCGCCGCACCGCACAGATGTTGCTCGGTGAAGCGGGCTGCG AGGTGATCACCGCCAGCGATGGCTTCGATGCGCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTCGTCGATGTGTTGATGCCGCGCCTGGACGG CTACCAGACCTGCGCGGTGATCAAGCACAACAGTGCCTTCAAGGACACCCCGGTCATTCTGCTTTCGTCACGTGACGGCCTGTTCGACAAGGCCCGCGGC CGGGTGGTCGGCTCCGACCAGTTCCTGACCAAACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCACGTGCCCGGTTTTGCCGCAGCCCAAC AACACGCACCCTGACCGCGCCCCGCCATGGCACGGTCTTTCTTTCCTGATGGGGAACCAGCATGGCCCGAGTTCTGATTGTCGACGACTCGCCGACAGAG
|
|
| DNA Sequence for Gene |
>PPS_4835
ATGTACCGATTGACCGAATGGCTGGAAAAGCACGGCTACCAGGTGCTCAAGGCCAACAACGGTGCCGATGGCGTGGCCTTGGCACGGCAGGACAAGCCCG ACGCGGTGTTGATGGACATCGTGATGCCCGGCATGAACGGCTTCCAGGCAACCCGTCAGCTCAGCAAGGACCCGGAAACCAGCACCATCCCGGTGATCGT GGTCACCACCAAGGACCAGGAAACCGACCGTATCTGGGCCACGCGCCAGGGCGCTCGTGACTTCCTGACCAAGCCGGTGGAAGAGGACGCGCTGATCGCC AAGCTCAAAGAAGTGCTCGGGGCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCACCCGCCCGCAGGGCGCGTCGCTGACCGCCTTCGAGTTGTTGCTGGACATCGACCGGCGCTGCCGCCTGCTGGTCGCCGACCAGCCACCGCAGGACAA CCGCCTGCAACAGTGGAGCGGCATCGGCTTCCGCATAGCCGGGCAATGGTTCGTCGCGCCCATGGGCGAGGTTGCCGAGGTGCTGCGCGAACCGCGCAGC AGCCGCGTCCCCGGCGTGCAGCCGTGGGTGTGCGGGGTAGCCAACCTGCGCGGGCGGCTGTTACCGGTGATGGACCTGAGCAGTTTCTTCGGCCTGGGCC ACGCCGCCCCGGGCAAGCAGCGGCGGGTGCTGGTGCTGGATCACGAGGACCTGTTCGTCGGCCTGCTGGTGGACGAGGTGCTGGGCCTGCAGCACTTTGC CCTCGACAGCCTGCAACTGTCGCCGCCACAGCCCCTGATCCGCGCGGCTGCACCTTTCGTGCAGGGGCATTTCCCGCGTGAACGCAACTGGGCGATCTTC
|
|
| Amino Acid Sequence |
>response regulator receiver protein
MYRLTEWLEKHGYQVLKANNGADGVALARQDKPDAVLMDIVMPGMNGFQATRQLSKDPETSTIPVIVVTTKDQETDRIWATRQGARDFLTKPVEEDALIA KLKEVLGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|