Pseudomonas sp. PH1b, U873_RS0107490

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGGCTGGCCCTTGTAGGAAAAACGCGAGGTGCCGTCAGGCATCAGGCCCTTGCCCTGGGTAGCACGAATGGCCTGGCAGAGGTTGGTCTTGCCCGACAG ACAGAATTTGCACTGGCCGCACTCCGGGGTGTACAGCGGGATCACGTGGTCGCCCACCGCCACGGAAGTCACGCCCTCGCCCACCGCCTCCACCACCGCG CCACCTTCATGGCCGAGGATTGACGGGAAGATGCCTTCCGGATCCGCACCCGAGAGGGTATAGGCGTCGGTGTGGCAGACACCGGAAGCGACGACCCGCA GCAGGACTTCGCCGGCCTTGGGCATGGCGACATCCACTTCGACGATTTCCAGGGGCTTCTTGGCCTCGAAGGCTACGGCAGCACGTGACTTGATCATCCT GACTCTCCAGTGAATAAAACGAGACAGTGAGTGTAAATCAGCGCCGCGCGATGAATAATCCAGGTGAAAGCAAAACATTATTGCCACACAGGGATAATCA
DNA Sequence for Gene
>U873_RS0107490
ATGAGTGAAAACCGCTGGGAAGGCATCGACGAGTTTGTCGCGGTCGCCGAATGCTGCCAGTTCACCGCTGCCGCCGAGCGCCTGGGCGTGTCCTCGTCCC ATATCAGCCGCCAGGTGGCGCGCCTTGAGGAACGTTTGCAGACCCGCCTGCTGTATCGCAGCACCCGCCGGGTCACCCTGACCGAAGCCGGGCAAACCTT TCTCCAGCATTGCCAACGCTTGCAGGATGGTCGCGATGAGGCGCTGCGGGCCGTGGGCGATCTGACCAGCGAACCCAAGGGCATGCTGCGCATGACCTGC GCCGTGGCCTACGGCGAGCGCTTCATCGTGCCACTGGTGACTCGATTCATGGGGCTGTACCCGCAATTGCGGGTAGACATCGAGCTGAGCAACCGGCCAT TGGACCTGGTGCACGAAGGCCTCGACCTGGCCATTCGCCTCGGGCGGCTGCAGGACTCGCGCCTGGTGGCCACCCGCCTCGCGCCGCGGCGCATGTACCT GTGCGCCTCGCCGTCCTATCTGGAGCGCTACGGGCGCCCCCACAGTCTCTCGGAGCTGAGCCGCCACAACTGCCTGATCGGCAGTTCGGACATCTGGCAA CTGGAACAGGATGGACGCGAGTTCTCGCAGCGGGTCCAGGGCAACTGGCGCTGCAACAGCGGGCAAGCCGTACTGGATGCAGCGTTGCAGGGGGTGGGTT TGTGCCAGTTGCCGGATTACTACGTACTGGAACATTTGCAGAACGGCACGCTGATTTCCCTGCTGGAAGCCCACCAGCCGCCCAATACCGCGGTCTGGGC GCTGTACCCGCAACAGCGCCACCTGTCTCCCAAGGTGCGCAAGCTGGTGGACTATCTCAGGCAGGGCCTGGCCCAGCGTCCGGAATACCAGGACGTGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCTGAAAGGCCGCTTGATCGGTGGAAAAGTCGGTGCTGTTTTCGCTCGATCGCGCCCGCACCAAGGCCACGGCAGTGGCTACAGAAAGGTTGGCGGA CGCAGGAGCGGACTCAGCGGCGATTGGACCAGCGCTGGCGCAGCCACTCCAGGTCCTCGGGACGAGTGACCTTGAGGTTGTCGGACCGCCCTTCGATCAA TCGTGGCGCCAGCCCGGCCCACTCCATTGCCGAAGCTTCGTCAGTGATAGAAACATCGGCCACCAGGCTGTCGGCCAAGGCACGATGCAGGGCTCCCAGG CGAAACATCTGCGGCGTATAGGCCTGCCAGATCAGGCTGCGATCCACGGTTTCCAGCACCCGTCCGTGTTTGTCCACCCGTTTGAGGGTGTCGCGGGCAG GAACCGCCAGCAGCCCTCCGACGGGATCGTGCGCCAGCTCACCCAGGAGCCTGTCCAGGTCATCACGGGACAGATTGGGTCGCGCGGCATCATGGACCAG
Amino Acid Sequence
>LysR family transcriptional regulator
MSENRWEGIDEFVAVAECCQFTAAAERLGVSSSHISRQVARLEERLQTRLLYRSTRRVTLTEAGQTFLQHCQRLQDGRDEALRAVGDLTSEPKGMLRMTC AVAYGERFIVPLVTRFMGLYPQLRVDIELSNRPLDLVHEGLDLAIRLGRLQDSRLVATRLAPRRMYLCASPSYLERYGRPHSLSELSRHNCLIGSSDIWQ LEQDGREFSQRVQGNWRCNSGQAVLDAALQGVGLCQLPDYYVLEHLQNGTLISLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDYLRQGLAQRPEYQDV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site