Pseudomonas sp. PH1b, U873_RS0107430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGATACCGTGATCGGCAACGGTGTGAAGCTGGACAACCAGATTCAGATCGCCCACAACGTCCAGATCGGTGACCACACCGCCATGGCCGCCTGTGTGGGG ATTTCCGGCAGCACCAAGATCGGCAAGCACTGTATGCTCGCGGGTGGTGTAGGCCTGGTGGGACACATCGAGATTTGCGACAACGTGTTCCTCACCGGGA TGACCATGGTGACCCACTCGATCACCGAGCCGGGGGCCTACTCTTCCGGCACTGCCATGCAGCCTGCTGCCGAGTGGCGCAAAAGTGCGGCACGTATCCG CCAGCTTGATGACCTTGCACGGCGTCTGCGTCAGTTGGAAAAGCGCGTTGGGGGCGTGACCCCTGATGGCAATGCTTCATCAGATGGCTGATACCATTTC CATATCAAGTGTGCACAGCCGCTAGACTGCCTCCTTGATTTGCTAGAGGAGCGTGCATTAGTCGCGCGCTCCCACTCTTTACTACAGGCTTCCCCCCGAA
DNA Sequence for Gene
>U873_RS0107430
ATGATGGACATCAACGAGATTCGCGAATACCTGCCTCACCGTTACCCTTTCCTGTTGGTGGATCGGGTGGTGGATCTGGATGTTGAGGGCAAGTGCATTC GTGCCTACAAGAATGTCAGCATCAACGAGCCGTTTTTCAACGGTCACTTCCCTGCGCACCCGATCATGCCAGGCGTGCTGATCATCGAGGCCATGGCTCA AGCTGCGGGCATTCTCGGCTTCAAGATGCTCGACGTGAAACCCGCCGACGGCACCCTCTACTACTTCGTCGGCTCCGACAAGCTGCGCTTTCGCCAGCCG GTACTGCCGGGTGACCAGTTGATCCTGGAAGCCAAGTTCATCAGCTGCAAGCGCCAGATCTGGAAGTTCGAGTGCCAGGCGTCGGTAGATGGCAAGCCGG TCTGCTCCGCGGAAATCATCTGCGCGGAACGCAAACTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTTGATTGACCCTCGCGCAATCATCGATCCGACGGCCGTGCTGGCCGACGACGTTGAGGTCGGCCCGTGGTCGATCGTCGGCGCTGGTGTGGAAATCGG CGAGGGTACTGTGATCGGGCCCCATGTGATTCTCAAGGGCCCTGCGCGGATTGGCAGGCACAACCGCATCTACCAGTTCTCATCGGTAGGTGAGGACACC CCTGACCTGAAGTACAAGGGCGAGGAAACCCGCCTGGTGATCGGTGATCACAATGTGATCCGCGAAGGCGTGACCATTCATCGTGGCACCATCCAGGATC GTGCGGAAACCACCCTGGGCGATCACAACCTGGTCATGGCCTATGCCCACATCGGGCATGACAGTGTCATCGGCAACCATTGCATCCTGGTCAACAACAC TGCCTTGGCCGGCCATGTGCACGTGGACGACTGGGCGATTCTTTCCGGTTTCACCCTGGTGCACCAGTACTGCCATATTGGCGCCCATAGTTTTTCCGGG
Amino Acid Sequence
>3-hydroxyacyl-ACP dehydratase
MMDINEIREYLPHRYPFLLVDRVVDLDVEGKCIRAYKNVSINEPFFNGHFPAHPIMPGVLIIEAMAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQP VLPGDQLILEAKFISCKRQIWKFECQASVDGKPVCSAEIICAERKL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site