Pseudomonas sp. PH1b, U873_RS0105810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGCTGGCCTGCACCGAGCGCAGCACCTTCATCCCGATCCTGGCCAACAGCTTTGCCCGGCACACCACCGAGGTGCTGGTGGAGCACGCCGAGCGCGAGC ACGGCGACTCCAAGTACAGCCCGATGCGCCTGATCAACCTGATGTTCGACCTGATCACCTGCATGACCACCACGCCCCTGCGGCTGCTGAGCATCATCGG CTTCGGCATGGCCGGCCTCGGTGCGGTGTTCGCCCTGATGCTGATCGTCCTGCGGCTGATCTTCGGCGCCACCTGGGCCGGCGACGGCACCTTCGTGCTG TTCGCGGTGCTGTTCGTGTTCACCGGTGGCCAGTTCATCGGCATGGGCCTCTTGGGTGAATACCTGGGGCGCATGTACAGCGACGTGCGCGCCCGCCCAC GCTTCTTCATTGAAAAAGTCTTGCGCAGCCAACCGGCGGCTCCGGCCCCGACTGTGACTGTCGACGGTTTAACTTCCACCCATACTGATCAGGTTTCGCC
DNA Sequence for Gene
>U873_RS0105810
ATGAGCAATAAAGCTATCGTCTTCGCCTACCACGACATCGGCTGTGCAGGCATCGAAGCCCTGCTCAACGCAGGTTATGAGATCGCCGCGGTGTTCACCC ACGCCGACGACCCCAAGGAAAACACCTTCTACGGCTCGGTGGCCCAGCTCTGCGCACGCAAGGGCATTGCCGTGCACGCCCCGGAAGATGCCAACCACCC GCTGTGGATCGAGCGCATCGCCAAGCTCGACCCCGACTACCTGTTCTCCTTCTACTACCGCAACCTGCTGAGCGAGCCACTGCTGGCCACCGCGAAAAAG GGTGCGTTCAACCTGCACGGCTCGCTGCTGCCGCACTACCGTGGCCGCGCACCGGCCAACTGGGTGCTGGTCAAGGGCGAAACCGAAACCGGCGTGACCC TGCACCGCATGGTCAAGCGCGCCGACGCCGGCGCCATCATTGCCCAGCAACGGGTCGCCATCGAGCGCAGCGACACCGCGCTGACCCTGCACCACAAACT GCGTGACGCCGCCGCCAGCCTGCTGCGCGACACCCTGCCGGCACTGGCCCAGGGCAAGATCACCGAGACCGCCCAGGACGAATCCAAGGCCAGCTATTTC GGTCGTCGCACCGCAGCGGACGGCAAGATCGACTGGCAGCGCCCGGCCGAAGAACTGTTCAACCTGGTACGTGCCGTCACCCAGCCGTACCCGGGCGCCT TCTGCGCCGTGGGCGAGCACAAGCTGATCGTCTGGAGCGCCGAAGTCGCCAAGGGCAATGAAGGCCAGGCCCCGGGCCGGGTCATCAGCGTCGACCCGCT GCGCATCGCTTGCGGCGAAGATTCCCTGGTCATCACCTCGGGCCAGCGCAATGCCAACGGCCTGTACCTGGGCGGCCCGCAACTGGCCAATGAACTGGGC CTGGTGGACGGCTCGATCCTGCGCGGTGCGGAGTCCGGCCGTAAACCACGTCGCACCCGGGTACTGATCCTCGGCGTCAACGGCTTTATCGGCAACCACC TGTCCGAGCGCCTGCTGCGTGACGACAAGTACGACGTCTACGGCCTGGACATCGGCTCCGACGCCATCGAACGCCTGCGCAGCCACCCCAACTTCCACTT CGTCGAAGGCGATATCAGCATTCACTCCGAGTGGATCGAATACCACATCAAGAAGTGCGACGTGGTCCTGCCGCTGGTGGCCATCGCCACCCCGATCGAA TACACCCGCAACCCACTGCGCGTGTTCGAACTGGACTTCGAGGAAAACCTCAAGCTGGTGCGCTACTGCGTCAAGTACAACAAGCGGGTGATCTTCCCGT CGACCTCGGAAGTCTATGGCATGTGCCAGGACAAGAACTTCGACGAAGACACCTCCAACCTGATCGTCGGCCCGATCAACAAGCAGCGCTGGATCTACTC GGTGTCCAAGCAGTTGCTGGACCGGGTGATCTGGGCCTACGGCGCCAAGGGCCTGAACTTCACCCTGTTCCGTCCGTTCAACTGGATGGGCCCGCGCCTG GACCGTCTGGATTCGGCACGCATCGGCAGCTCCCGGGCCATCACCCAGTTGATCCTCAACCTGGTGGAAGGTACGCCGATCCGTCTGTTCGACGGTGGCG AGCAGAAGCGCTGCTTCACCGACATCGCCGACGGCATCGAAGCCCTGGCGCGCATCGTCGACAACGACAATGACTGCTGCAACGGCCAGATCGTCAACAT CGGCAACCCGGACAACGAAGCCAGCATCCGCCAGCTGGGCGAAGAGCTGCTGCGTCAGTTCGAAGCCCACCCGCTGCGCAGCAACTTCCCGCCGTTCGCT GGTTTCCGCGACGTCGAAAGCAAGGCCTTCTACGGCGCCGGCTACCAGGACGTGGAACACCGCAAGCCAAGCATCGACAACGCCAAGCGCCTGCTGAACT GGGAGCCGACCGTGGAAATGAGCGAAACCATCGGTAATACCCTGGACTTCTTCCTGCGTGAAGCCATGCTGGAAATCGCCGATCGCGCCAAGAAAGAAGC ACGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCAGGCAGGTCTGCGCATTGATGTCGATACCTACCGCGGCACCCGGGAGGGGGTGCCACGGCTGCTCGAAACGCTGGATGAGGCCGGGGTCAAGGCGAC CTTCTTCTTCAGCGTCGGGCCGGACAACATGGGGCGCCACCTGTGGCGCCTGATCCGTCCGCAGTTCCTCTGGAAAATGCTGCGGTCCAATGCCGCGGGC CTGTACGGCTGGGACATTCTCCTGGCCGGCACTGCCTGGCCGGGCAAACCCATAGGCCGGGACCTGGGGCACTTGATGCGCCAGACCCTGGCCGCCGGCC ATGAAGTCGGCCTGCACGCCTGGGATCACCACGGCTGGCAGGCCAATACCGGGCGTTGGAGCCAGGCACAACTGATCGAACAGATCCGCCTGGGCGTCGA CTGCCTCAACGATATTCTCGGGCAAGCGGTGAGCTGCTCGGCGTCCGCCGGTTGGCGCGCCGATGAACGCGTCATCGAGGCCAAGCAACAATTCGGCTTT
Amino Acid Sequence
>UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSNKAIVFAYHDIGCAGIEALLNAGYEIAAVFTHADDPKENTFYGSVAQLCARKGIAVHAPEDANHPLWIERIAKLDPDYLFSFYYRNLLSEPLLATAKK GAFNLHGSLLPHYRGRAPANWVLVKGETETGVTLHRMVKRADAGAIIAQQRVAIERSDTALTLHHKLRDAAASLLRDTLPALAQGKITETAQDESKASYF GRRTAADGKIDWQRPAEELFNLVRAVTQPYPGAFCAVGEHKLIVWSAEVAKGNEGQAPGRVISVDPLRIACGEDSLVITSGQRNANGLYLGGPQLANELG LVDGSILRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDKYDVYGLDIGSDAIERLRSHPNFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQDKNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAKGLNFTLFRPFNWMGPRL DRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIVDNDNDCCNGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRSNFPPFA GFRDVESKAFYGAGYQDVEHRKPSIDNAKRLLNWEPTVEMSETIGNTLDFFLREAMLEIADRAKKEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site