Pseudomonas sp. PH1b, U873_RS0104430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGGCTTGATTCACCGCGAGCCAGCCATTGACCGCGTCCTCACCTGCGTCGGCGAAGGCCCGTTGCAGCAGCTTGACCTGCTCCCGGCGCAGGGACTGTTC GAAGCGCACGCCATCGGCCGTCAGTTCCAGCAGGCGTTTGCGCTTGTCACTCTCTGGCGCGAGGCTTTCCACCAGGTGCATCTCCAGCAACTGGCGCAAG GGTGTGTTCAGCGCCTGCTTGCTCACCCCCAGCAGGTTCAGCAGCTCCTTGACGCTGAGCCCGGGATAGCGGGCGATGAAAAACACGATGCGCTGATGCA CTCGGCTCAAGCCGCGGCGCTCGAGCATCTCGTCGGCCTTGGCGGTAAACGCCTGGTAGCCGAAGAAGAAGGCTTCCATGGCGGCTTGTTGCGAGTTCTG GTTTTTAAGGTCAAGCATATTGACGTATCTGCTCGGGGCGGCGTAATTTCGGTCAAGTAGTTTGACGTATTTCCCTCAGCCTTCGCTAGCGGTGGTCCCC
DNA Sequence for Gene
>U873_RS0104430
ATGGCTTTCTCCGAACTTGTATCGCGCCTTAAAAGCTCCCTGATCCGTGAAATTCTCGCCGCGGCCCAGCGCCCGGAAGTGATGTCGTTCGCCGGGGGGC TGCCTGCCGAAGTGATGCTGCCTCCGGTGCAGTGGCAGGACATGCCCCTGTCCATGGGGCAGTACGGCATGAGCGAAGGAGAGCCGCAACTGCGTGAAGC CCTGGCAGAACAGGCTCGCCAGCTGGGTGTGCCCTGCAGCGCCAGCCAGGTGCTGGTGGTCAGCGGCTCGCAGCAGACCCTGGATCTGGCGGCCAAGCTG TTCATCGACCCCGGTACCGAGGTGCTGCTGGAGGCACCGACCTATCTGGCCGCCCTGCAGATCTTCCAGTTGTTCGGCGCCGCCTGCCTGAGCGTGCCGC TGGAGGCCGACGGTCCGGACCTGACCCGGCTGCGTGCACGCCTGGAGCAGCATCGGCCGGCCTTCATCTACCTGATCCCGACCTTTCAGAATCCCTCGGC AGTGCGCTACAGCGAAGCCAGGCGTGATGCCGTGGCGTCCTTGCTGGACGAGTTCGGCGTGACCCTGATCGAAGATGAGCCGTACCGCGAACTGTCCTTC GATGGCGGCAGCGCCACGCCTATCGTCAGTCGTCTGCAGAAGGCCAGTTGGATCTACACCGGCACCGTGTCGAAAACCCTGCTACCCGGACTGCGGGTTG GCTACCTGATCGCCAGCCAGGACCTGTTCCCGCATCTGCTGCGACTGAAACAGTCCGCGGACCTGCACACCAACCGCGTCGGCCAGTGGCAGGCCATGCA GTGGATCGGCACCACGCAATACCAGCAGCATCTGCATGAGCTGCGCGGCTTCTATCGCCAGCGCCGCGATGCCTTCCAGGCGGCCCTGGAAACCCATTTC AGTGATCTGGCGCAATGGCAGGTGCCCCAGGGCGGGCTGTTTTTCTGGTTGAGCTTGAAACAACCGCTGGACACCCGCACCTTGCTTGATTCAGCGTTGG CACAGGACGTGACGTTCATGCCCGGTGAGCCCTTCTTTAGCGAGCCTGAGCGCAACCTCGGCCATTTGCGGCTGAATTTCAGCCATATCGATCCAGCCCG GTTGGACGAAGGCCTCAAGCGGCTGGCCACCGTGATACGTCAAGCACAGGCTGCACAGGCAGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGGAAGGCCATGTATAAGGTTTACGGTGATTACCGTTCGGGCAATTGCTACAAGATCAAACTGATGCTCAATCTTCTGGGGCTGCCCTACCAATGGCAG GCGGTGGATATTCTCGGGGGCGATACCCAGACCGAAGCCTTCCTGGCGAAGAACCCCAACGGCAAGATCCCGGTGCTGGAGCTTGAGGACGGTACATGCC TGTGGGAGTCCAATGCGATTCTCAACTTCCTTGCCGATGGCTGCGAGTTCCTGCCCAGCGAGCCGCGCCTGCGCACCCAGGTCTTGCAATGGCAGTTCTT CGAGCAGTACAGCCATGAGCCCTATATTGCCGTGGCGCGCTTCATCCAGCAGTACGAGGGCTTGCCCGAGGAGCGTCGCGAGGAATACCTGAAGTTGCAC AAGCGCGGCTACAAGGCATTGGAGGTGATGGAAAAGCAACTGAGCCGCACGCCTTACCTGGTGGGCGAGCACTATTCCATTGCTGACATCGCACTGTTTG
Amino Acid Sequence
>GntR family transcriptional regulator
MAFSELVSRLKSSLIREILAAAQRPEVMSFAGGLPAEVMLPPVQWQDMPLSMGQYGMSEGEPQLREALAEQARQLGVPCSASQVLVVSGSQQTLDLAAKL FIDPGTEVLLEAPTYLAALQIFQLFGAACLSVPLEADGPDLTRLRARLEQHRPAFIYLIPTFQNPSAVRYSEARRDAVASLLDEFGVTLIEDEPYRELSF DGGSATPIVSRLQKASWIYTGTVSKTLLPGLRVGYLIASQDLFPHLLRLKQSADLHTNRVGQWQAMQWIGTTQYQQHLHELRGFYRQRRDAFQAALETHF SDLAQWQVPQGGLFFWLSLKQPLDTRTLLDSALAQDVTFMPGEPFFSEPERNLGHLRLNFSHIDPARLDEGLKRLATVIRQAQAAQAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site