Pseudomonas sp. PH1b, U873_RS0102370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACGACAGATCCTGGCCATTGCCGAGTTCACCGAGTGCGACAAGGTCACCGGCGACGACTGCTTTATCGCTCGCCTCCAGGTGCGCTCCATGGAACAACT GGACACCCTGCTGGACCGCCTCAATCACTTCGCCGAGACCAACACCGCGATCGTCAAGAAATCGCCGATCAAGCGGCGTTTGCCGCCCCTGGAATGAGCG CGTGATGCAGGGGCGTTCCGAGGTGCCGAGCGGGGAAAAAAACCGCCATCAAACGCCTCGAGAACGCCTGACCTAGAGGTATTTTCACAAGAAAGAAGCC AATATCCTTACAACATTTAAGGATTTTTCTCACATGGCATAAGACAATTCTTAAAGTGGCCAGGGGCGGCTTTTTGGCGCCAATTTCAGTGCTACCCTGC GAATCTTCTGACGAACCCACAAGCAAAATACCTGCTCCTTTGAAGGAAGCCGCGCATTGCAGTGCGCTACTGCCTGTCAAAAACCCGAGTAATAAAGACG
DNA Sequence for Gene
>U873_RS0102370
ATGCCGATCCGCGTCCAGATAGCCGATGACCATCCCCTGACCCTGATTGGGATACACACCCTGCTGGAGAACCACGCCGACCTGGAGGTCGTTGCCCAAG CCCACAGTGTGGAAATCCTCCTGGAGAACCTGCAGCGCCAGCCCTGTGACCTGCTGTTGACCGACCTGATGATGCCCGGTGGCGACCAGGTCGACGGGAT CCGCCTGATCCGTCGCCTGCGTGGGCTGTATCCGCAATTGGCGATCGTGGTGATCACCATGCTCGACAACCCGGCGTTGATCAGCAGTGTGCTCAAGCTC GGGGTCCAGGGCCTGGTAAGCAAGCGCGGCCTGCTCAACGACCTGCCCAAGGCGGTGGCCGCCAGCGCCCGTGCGCCCTTCGTCTCGTCATCGATCCAGC ACCTGCTGGACACCAGTACCGCGCTGCACGGCAAGCCGCTGTTGCAGCCCGAGCAGCTGTCCGCGCGGGAGATCGAAGTGCTGCGCCTGTACGGCAGCGG CATGAGCATCGGTGCCATTGCCCTGCACCTGTGCCGCAGCAAGCAGACCATCAGCACGCAAAAAAGCAGCGCCATGCGCAAACTCGGCCTGGACACCTCG GCCAGCCTGTTTCTCTACATCCAGGAACATGGCCTTTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGCCGAGTGCGGCAGATCCCGGAGCTTCCCCCTTATGCCCCTGATTTCGCTTTCCTTCGTGCGCCGGAGGATGCAGCGCTTTTGCCTGCTGATCATTC CCCTGGCCAGCCTCGGCCTGGCGCCAACCTCCGACGCCGATGAGCGCGCCTCGGCAACGGACTGCAACCTGCCCCTGAACAAGCTGCTGTCGATGCGCAA CAGCCTACCCCGCAAGACCCTCAAAGTGGCCCGCATCGTCCCCCCCGAACGCCCCCTGGAAAGCGCCGGCAACCAGGTCCTGAAGTCGATCTCCGATGAA TACCTGAAGCTGATCGGCGAACAGCTCGACCTGCATTTCCAGAACGTCGAGGTGCCCTCCCCCCAGGCCGCCATCGATGCCCTGCGCGAACACCGGGTCG ACCTGCTGTCACGCGCCAGTGACTTCGAGGCGGCCAACCCGGACCTGCGCCTGAGCCAGCCCTATCTGCGCAACCAATCGATCATCGTCGGCCGCATCAA
Amino Acid Sequence
>LuxR family transcriptional regulator
MPIRVQIADDHPLTLIGIHTLLENHADLEVVAQAHSVEILLENLQRQPCDLLLTDLMMPGGDQVDGIRLIRRLRGLYPQLAIVVITMLDNPALISSVLKL GVQGLVSKRGLLNDLPKAVAASARAPFVSSSIQHLLDTSTALHGKPLLQPEQLSAREIEVLRLYGSGMSIGAIALHLCRSKQTISTQKSSAMRKLGLDTS ASLFLYIQEHGLS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site