Pseudomonas sp. PH1b, U873_RS0102140

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAGGCCCGGGAGTTCTACCTGGATTTCCTCGGTTTTGCCGTCGAGTTCGAGCATCGCTTCGAGGCCGATCTGCCCTTGTACCTGGGCATCAGCCGCGGT GGTCTGCAGTTGCATCTGTCGGAGCACCACGGCGATGCCAGCCCGGGTTCGACGATCTTCGTACCGATGCACAATATTGAGTTGTTACGGGACGAGTTGC AGGGCAAGCGCTACGGCTATGGGCGGCCGGATATTGTCCAGCAGGGCTGGGGCCAGGTGCTGGAAGTCTACGATCCGTTCGGCAATCGGATCCGCTTCTG CCAAAGCTGATGCGGCGGGCGGACTGGGTGCGCCCGGTCCGCTTGGCCTTGGCGGGCCCCGATCAACCCCGGTGCTCGCGGCAAGCGGCCGAGACGGCGC CCGGCACCAGTCGGCGGCCAGCGCCGAAAAGCACGAGACTTCCCGCGCAAAAGCCGGATAATACCGGCCAATTTTTTGCTCGTGATGCTGGTGATCCCCC
DNA Sequence for Gene
>U873_RS0102140
ATGGAAATCAAGGTTAACTTTCTCGACAACCTTCGACTTGAAGCCAAGTTCGATGACTTCACCGTGGTGGCCGATCAACCTATCCGCTACAAGGGCGATG GCTCGGCACCGGGCCCCTTCGACTACTTCCTGGCCTCATCGGCCCTGTGCGCCGCGTACTTCGTGAAGCTGTACTGCGAGACGCGCAACATCCCCACCGA CAATATCCGCCTGTCGCAGAACAACATCGTCGACCCGGAAAACCGCTACAACCAGATCTTCAAGATCCAGGTCGAGCTGCCGGCGGATATCAGCGCCAAG GACCGCCAGGGCATCCTGCGTTCCATCGACCGTTGCACGGTCAAGAAAGTGGTGCAGACCGGGCCCGAGTTCGTCATCGAGGAAGTGGACAACCTCGACG CCGATGCCCAGGCCCTGCTGATGCTCGACACCGCCTCCCAGACCCGCACCTATGTGCCGGGCAAGGACCTGCCGCTGGAGCAGACCATCGCCAACATGTC GGGGATCCTCGCCGGCCTGGGCATGAAGATTGAAATCGCCTCCTGGCGCAACATCGTGCCCAACGTCTGGTCGCTGCATATCCGCGATGCCCACTCGCCG ATGTGTTTCACCAACGGCAAGGGTGCGACCAAGGAGGCCGCGCTGGCCTCGGCCCTGGGCGAGTTCATCGAGCGCCTGAACTGCAACTTCTTCTACAACG ATCAGTTCTGGGGCGAGGAGATCGCCAACGCGGACTTCGTGCATTACCCGCAAGAGCGCTGGTTCAAGCCCGGCCGCAAAGATGCGCTGCCAGAGGAGAT CCTCGACGCCCACTGCCTGGCGATCTACAACCCCGAGGGCGAACTGCTGGGCTCGCACCTGTACGACACCAACTCGGGCAATGTGGAGCGCGGCATCTGT TCGCTGCCGTTCGTGCGCCAGTCCGATGGCGAGGTGGTGTATTTCCCTTCCAACCTGATCGAGAACCTCTACCTCAGCAACGGCATGAGCGCCGGCAACA CCCTGGCCGAAGCCCAGGTGCAGTGCCTGTCGGAAATCTTCGAGCGCGCGGTGAAGCGCGAGATCCTCGAAGGCGAGCTGGCCCTGCCGGATGTGCCCGA GGAAGTGCTGGCCAAGTACCCCGGCATCCTGGCGGGCATCCAGGGCCTGGAGGAGCAGGGCTTCCCGGTGCTGGTGAAGGATGCGTCCCTGGGCGGCGAA TTCCCGGTCATGTGCGTGACCCTGATGAACCCGCGCACCGGCGGCGTGTTCGCCTCCTTCGGTGCTCACCCAAGCCTTGAAGTGGCGCTGGAACGCAGCC TCACCGAGCTGCTCCAGGGCCGCAGCTTCGAAGGCCTGAACGACCTGCCGCAGCCGACCTTCGAAGGCCACGCGGTGACCGAGCCGAACAACTTCGTCGA GCACTTCATCGATTCCAGCGGTGTGGTGTCGTGGCGTTTCTTCAGTGCCAAGGCCGACTTCGAGTTCGTCGAGTGGGACTTCTCCGGCCAGGGCGAAAAC TCCAACGCCGACGAGGCCGCCACGCTGTTCGGCATCCTCGAAGGGCTGGGCAAGGAAGCCTACATGGCGGTGTACGAGCACCTGGGGGCCACGGCCTGCC GCATCCTGGTGCCGGACTACTCGGAGATCTACCCGATCGAGGACCTGATCTGGGACAACACCAACAAGGCCCTGCTGTTTCGCGAAGACATCCTCAACCT GCACCGCCTGGAGGCGCGCCACCTGCGGGCCTTGCTCAAGCGCCTGGACAACAGCGAGCTGGATGACTACACCGACATCACCACCCTGATCGGCATCGAG TTCGACGACAACACCGCCTGGGGCCAGTTGACCATTCTCGAATTGAAGTTGCTGATCTGCCTGGCGTTGAAGATGTACGACGAGGCCAAGGAGCTGGTGG AGGCCTTCCTGCAGTACAACGACAACACCGTGGAACGCGGCCTGTTCTACCAGGCGGTGAATGTGGTGCTGGAAGTGCAACTGGACGAGGACCTGGAACT GGCCGACTACGAGGCCAACTTCCGCCGGATGTTCGGCAACGAGCGGATGGACGCGGCGGTGGGCTCGGTGGACGGCAGCGTGCGCTTCTTCGGCCTGACC CCCACCAGCATGAAGTTGGAAGGGCTCGACCGGCACCTGCGCTTGATCGACAGCTACAAGAAGCTCCACAGCGCACGGGCCAAGGCGAAAGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACTCGGTCACAACCCTGATGGAAAAGTACCTCAAGGGCTAAGGGCCCACGGGGTGACAGCTGGCAAGAGAACCTGCTCTGGCCGGGGTTACCGGGCACTG CCCCGGTAGCCCGGGGGGCGGGGTTTCTGGCCGGTGCTCGGTGGTGGCCATGGGGGGGCGGCTGGGCGCCCCAGGGGGAGCAAGCGCCCTCGCCACAGAT GAGCCTGCGTTCGCCCTGTCCCTTGGCGGGTCGGCATGGCCAAAGCCCCTTGTTTTGTGGGGCTGGCCAGCCGGCCCGGCGACCTCCCGAGGGATCGGCA CTAGCCATGTGCCGGTATCTTGTCAGCCTTGAAAAACTGCCTATATGATCGGCGCGCCAGGCTCGCCGCGGTGGATGAGGCTGGGCGCCGCACAACCGAT GCCAGTGGCCTGCACCTGTCTGTCCGGCTGGGCAAGGCACGGGTTTGATGTTCTCCAACGCTCTACAGGGATGTTCCAGCGATGAAAACCAAGATCAAGG
Amino Acid Sequence
>hypothetical protein
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCETRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISAK DRQGILRSIDRCTVKKVVQTGPEFVIEEVDNLDADAQALLMLDTASQTRTYVPGKDLPLEQTIANMSGILAGLGMKIEIASWRNIVPNVWSLHIRDAHSP MCFTNGKGATKEAALASALGEFIERLNCNFFYNDQFWGEEIANADFVHYPQERWFKPGRKDALPEEILDAHCLAIYNPEGELLGSHLYDTNSGNVERGIC SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGELALPDVPEEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGE FPVMCVTLMNPRTGGVFASFGAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFEGHAVTEPNNFVEHFIDSSGVVSWRFFSAKADFEFVEWDFSGQGEN SNADEAATLFGILEGLGKEAYMAVYEHLGATACRILVPDYSEIYPIEDLIWDNTNKALLFREDILNLHRLEARHLRALLKRLDNSELDDYTDITTLIGIE FDDNTAWGQLTILELKLLICLALKMYDEAKELVEAFLQYNDNTVERGLFYQAVNVVLEVQLDEDLELADYEANFRRMFGNERMDAAVGSVDGSVRFFGLT PTSMKLEGLDRHLRLIDSYKKLHSARAKAKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site