Pseudomonas sp. RIT357, BW43_RS01075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT357 contigs9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCGATAGCTGTTGTTGAGTTCAATCTCGATCTGCACCTGAGGGTACTGCTTGGAAAATTCCAGCAACAAGCCATCGAAGAAAGTTTCGCCTAATGAAAC GGGAACCGTCATACGCACCGGCCCGGCCAGATCGTCCTTGAGCCTCGCCAGTGCCTGACGCGCACGTTCCACCTGCACCACCAATGCCTGGGCCTGTGGC AACAACGCCGCGCCGGCAGCGGTCAGGGTGAGCTTGCGGGTGGTGCGGTGCAACAACACCACACAAAACTGCGCTTCCAACTGGGAGATACGCTTGGATA ACTGGCCCTTACTGCAGCCCAGTTGCTCGGCGGCCACCGTAAAACTGCCGGCTTCGATCAGTACGGCAAAGGCCGCCAGGTCATCCATCTCGCTCATGGA TTGTTTCCATTTGAAAACCAAAGGTTGCCTATTACCACGTTTATCCAGCGAAAAAGCCACCCTAGACTGAGCCCTCACTTATCACTGGAGGAACAGCACC
DNA Sequence for Gene
>BW43_RS01075
ATGAAAATCCTATTGATTGGCGCGAGTGGCACCGTCGGCTCGGCAGTCAAGGCCGAACTGGCTCAGCGTCATGAAGTGATCAGCATCGGCCGCACCAGCG GCGACTTCCAAGTGGATATCAGCGACAGCGCGTCAATCCGCAGGTTGTTTGAGCAAACCGGTAAATTCGACGCCCTCATCTGCGCGGCCGGTAGCGTGAA TTTCGTGGCGCTGGGTGATATGAGCGAAAACGACTTTGAACTTGGCCTGCGTGACAAGCTGATGGGCCAGGTAAACCTGCTGCTGATAGGCCGCGAGTAT GCTAACGACGGCGCCTCGTTCACCTTCACCAGTGGCATTCTCAACCGTGATCCGATTCGGACTGGCGCTTCTGCGGCGCTGGTCAATGGCGCACTCGATG CGTTTGTCAAAGCGGCAGCGATCGAATTGCCACGAGGCCTGCGCATCAACTCCGTGAGCCCCACAGTGCTGGAAGAGGCCATGGGCAGCTACGCACCTTA CTTCCGAGGCTATAAGCCGGCTCCGGGCGCTGACGTGGCCTTGGCCTACGCTAAAAGCGTAGAAGGCCTACAGACCGGCCAGACATTTATGGTTGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGTAAGGGTTGTAAGAATTACCTGAAGCGGGACAGCGGGGTTGTGATGCACCGCCAGCCTGCGTAACGTGGCGGCACTTGCCTGGAGACCCCGATAATG CGTGCCGCCCGTACCTTTGCTTTGTGTGCTTTGCTTCCCTTTCTAACCGCGTGTCAGGTCTTCGAGAGCGAGCCGGCCAAGCCGTCTACGGTTGGGCTGA CCCGCATGCAGGGCCAACTCACAGCCGTAGGCGACAAACTGTTGTTCCAAGCGTGCCACGACCAACGTAACTACGTGGTCAAGGACACCGGCGGCACCAG CATCCTGCAGGAAGCCGCCTCCCTGGCCGGCCAGCAAGGTGCGCTGTTTGCCGACCTGCGCGGTAAGTTTTCGGGCGTCGCCACCGGCACTCAGGGCGAA GTGGAGTTGCAACAGCTCTACCGTGTCGAACGGTCGACCTCGGCCTGCGACGACCCCGATTTCAAACGCATGATCCTGCGCGCCAACGGCCACAAGCCGG
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGASGTVGSAVKAELAQRHEVISIGRTSGDFQVDISDSASIRRLFEQTGKFDALICAAGSVNFVALGDMSENDFELGLRDKLMGQVNLLLIGREY ANDGASFTFTSGILNRDPIRTGASAALVNGALDAFVKAAAIELPRGLRINSVSPTVLEEAMGSYAPYFRGYKPAPGADVALAYAKSVEGLQTGQTFMVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site