Pseudomonas sp. RIT357, BW43_RS05035

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	30	323	2.9E-73
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	189	362	1.28E-43
Gene3D	G3DSA:3.55.50.10	-	-	-	95	188	2.6E-86
PANTHER	PTHR32305	-	-	-	67	515	7.0E-71
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	365	453	1.94E-30
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	387	453	8.4E-13
Gene3D	G3DSA:2.30.110.50	-	-	-	22	325	2.6E-86
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	445	600	3.3E-26
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	10	522	0.0
Gene3D	G3DSA:4.10.220.110	-	-	-	221	280	2.6E-86
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	10	184	1.3E-54
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	355	457	1.5E-36
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	22	505	1.2E-117

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.