Pseudomonas sp. RIT357, BW43_RS06645
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. RIT357 contigs5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTGGCGCACGGTGTTTCCGCCGCTGCACTCTTTATCCTGAGTGGCCAGTTGTACGAGCGCCTGCACACCCGTGACATGCGTGAGATGGGCGGCGTGTGG TCGCGCATCGCGTACCTGCCGGCGATCAGCCTGTTCTTTGCCGCTGCCTCGTTGGGCTTGCCGGGTACCGGCAACTTCATCGGCGAGTTCCTGATCCTGA TGGGTGCCTTCGTGCAAACGCCTTGGATCAGCGCCATTGCTACTTCCGGCCTGGTATTCGGTTCGGTCTACTCGCTGATCATGATCCACCGCGCCTACTT CGGCCCGGCCAAGTCCGACACCGTCCTGAAAGGGATGGATGCTCGCGAACTGATCATGGTGCTCGGCCTTGCGGTGCTGCTGATCTACATCGGCGTGTAC CCGCAACCGTTCCTGGACACTTCTGCCGCAACGATGCATGGCGTGCAGCAGTGGTTCGGCACCGCCTTCTCTCAACTCGCTTCGGCCCGGTAAGAGCGCT
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| DNA Sequence for Gene |
>BW43_RS06645
ATGGAATTCACGATCCAACACTTTATCGCGCTTGCGCCGCTGCTGATTACCAGCCTCACCATCGTGGTGGTGATGCTGGCAATCGCCTGGCGCCGCAATC ACTCACAAACGTTCCTGCTGTCCTGTGCCGGTTTGAACCTGGCCTTGCTGTCGATTATCCCGGCACTCAAGGTCGCGCCACTGGCGGTGACCCCGCTGAT GATGGTCGATGACTTCGCGCTGCTGTATATCGCGCTGATCCTCGTCGCCACCCTCGCCTGCGTCACCCTCGCCCACGCCTACCTCGGCGAAGGCGGCACC GGCTACCCAGGCAATCGCGAAGAGCTGTACCTGCTGATCCTGCTGGCTGCGGCCGGCGGTATCGTGCTGGTCAGCGCACAGCACCTGGCCGGCTTGTTCA TCGGCCTGGAACTGCTGTCGATCCCGACCTACGGCCTGGTGGCATACGCCTTCTTCAACAAGCGCTCCCTGGAAGCCGGCATCAAGTACATGGTGCTGTC GGCGGCCGGTTCCGCGTTCCTGTTGTTCGGTATGGCCCTGCTCTACGCCGAAGCCGGCAGCCTGAGCTTCACCGGTATCGGCCACGCACTGGCTGCCACC AACAGCCCGGCGCCGATTGCCCAACTGGGCCTGGCGATGATGCTGATCGGCCTGGCATTCAAGCTGTCGCTGGTGCCGTTCCACCTGTGGACCCCAGACG TGTACGAAGGCGCCCCGGCGCCGGTGGCTGCGTTCCTGGCTACCGCGTCCAAGGTTGCTGTGTTTGCCGTGATGGTGCGTCTGTTCCAGATCTCGCCTGC TGCCAATACCGGCGTGCTGAGCAACGTGCTGACCGTGATCGCCATCGCGTCGATCCTGTTCGGTAACCTGCTGGCCCTGACCCAGAACAACCTCAAGCGT CTGCTGGGTTACTCGTCCATCGCTCACTTCGGCTACCTGCTGATCGCCCTGGTGGCGAGCAAAGGCCTGGCCGTGGAAGCCATCGGCGTTTACCTGGTCA CCTACGTGATCACCAGCCTCGGCGCCTTCGGTGTAATTACGCTGATGTCCTCGCCGTACAAAGGCCGTGACGCTGACGCCCTGTACGAGTATCGCGGCCT GTTCTGGCGCCGCCCGTACCTGACCGCCGTACTGACCGTGATGATGCTGTCCCTGGCCGGTATCCCGCTGACCGCGGGTTTCATCGGCAAGTTCTACATC GTCGCTACCGGTGTAGAAGCCCACGAGTGGTGGCTGGTTGCGTCCCTGGTACTGGGCAGCGCTATCGGCGTGTTCTACTACCTGCGCGTGATGGTCACCC TGTACCTGATCGAGCCAAACCTGCGCCGTGTGGATGCCGAGCTGCATTGGGAACAGAAGGCAGGCGGCGTGATGCTGCTGGCCATCGCCCTGCTCGCGTT CTTCCTGGGCGTGTACCCACAACCGTTGCTCACCCTGGTGCAGCACGCGGTACTGGGCGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCTTAGCGGGATGCAGTAAACAAAACGGCGCCTTCGGGCGCCGTTTTGCGTTTCTGGATGCCCTGCAACAGGGCGTTCACCTCACTCGTTTTGGGCCA AATCGCGGATGGCCCAAAATTGCATATCCAACCCAGGAAACCCGGCGGGTACATGGATCGCAAAACCGCTCGACTGGCTCAACAGTTGCCAATACTCGCT GCTGCGATCAAGTTCGAAATACGTGCAGCCCGCATAGAACGGCAATTGCCGTGGGGCTGCCGGCAAAGGCCGCAGGCCAACACCCGGCAGTTGCAGGTTG ACCAGGTCGCGGATTTTCTCCATCGAGCCGATCTTGACCTGGGAGGGGAAACTGCTGCGCACGCTGTCGGCCGCCATTTGAGCCTGAACCACCAGGATGA AGGTGGCCGAGGCCAGTAACGCCCGGTCCGGCAGCACGGCCACACGGATGCCGTATTGGCGCTCTTCCAAGGGAATAGCGATGGCCCGCGTATCCATCAC
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| Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MEFTIQHFIALAPLLITSLTIVVVMLAIAWRRNHSQTFLLSCAGLNLALLSIIPALKVAPLAVTPLMMVDDFALLYIALILVATLACVTLAHAYLGEGGT GYPGNREELYLLILLAAAGGIVLVSAQHLAGLFIGLELLSIPTYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEAGSLSFTGIGHALAAT NSPAPIAQLGLAMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPAANTGVLSNVLTVIAIASILFGNLLALTQNNLKR LLGYSSIAHFGYLLIALVASKGLAVEAIGVYLVTYVITSLGAFGVITLMSSPYKGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI VATGVEAHEWWLVASLVLGSAIGVFYYLRVMVTLYLIEPNLRRVDAELHWEQKAGGVMLLAIALLAFFLGVYPQPLLTLVQHAVLGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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