Pseudomonas sp. RIT357, BW43_RS08720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT357 contigs4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGAGAAGCAAGTGATGCCGCCCTTGAGTTGCTCGGCGATGGCCAGGTCGGTGCCATCACGCACGAAGGCTTCATCGACCCACTTGGCTTCGGCGGGCCA GATGTGTTTTTCCAGCCAGGTCATCAAGGGCAGGTCATCGGCCAGGCCGCGAAACAGGCTCATCGCCGCGTGCCCGTGGGCGTTGATCAGGCCTGGGCTG AGCAGCATCCCCGGCAGTTCGCGCACCTCAGTGGCTGACAGCTTCAAGGCAGCGGCCCGCGGCCCGATAAAGGCAATGCGTCCATCGCGGATGCCCACGC CATGTTCCTTGAGCACCACGCCAGCAGGTTCGACAGGTACCAGCCAGGTTGGCAGTAGCAGTAAGTCGAGCGGGGCGGCAGTGGAGGTCATCGCAGGCTT CTTCCCGGGCAGCTACAAAAGAAGCGCGAAGTATACCCGAGCGTCCTGGCTGGCGGATCGCTATAATCGGCGGCTTTTGTTCATGAGTGCGGAGTAAGGG
DNA Sequence for Gene
>BW43_RS08720
ATGCGCGACCGACTGTTGGCAGCGGAGAAAGTGAAGGCCATCGATTGGCGTGATGGCACGCTGCACCTGCTCGATCAGCGTGCCTTGCCGTCCCAGGAAA ACTGGGTGGCCTGCTCCACGGTCGACGACGTGGCTGCCGCCATTCGCACCATGGTGGTGCGTGGTGCGCCGGCCATCGGTATCAGTGCGGCCTATGGCTT GGTTCTGGCCGCCCGTGATCGTATCGCCGAGGGCGAAGACTGGCAGGCTGCGTGGGAGGAAGATTACGCGCTGCTGGCCGATACTCGTCCCACAGCGTCG AACCTGTTCTGGGCCCTCAAGCGCATGCGCGATCGCCTGGATCGCATCAAGATGCACGCCGATCCGCTGGCAGTCCTGGAAGCAGAGGCCATCGCGATCC ATGAAAGTGACCGCGAAGCCAACCTTGTGATGGCGCAGTTGGGCGTTGAGCGGATTCGCAAGCACCAGGGTAACGCTCAGGCGATCCTGACCCATGGCAA TGCCGGCGCGTTGGCGACGGGCGGTGTCGGCACGGCCCTCGGGGTTGTGCGTGCGGCCTTCTTGGAGGGCTTGGTTGAACACGTCTATGCCAATGAAACC CGGCCCTGGCTGCAAGGTTCGCGGCTGACGGCCTGGGAGTTGGCGGGCGAGGGCATCCCTGTCACGGTCAATGCCGACTCGGCGGGCGCGCATATCCTCA AGACCAAAGGCGTGACCTGGGTGATCGTCGGGGCTGACTGTATTGCGGCCAATGGAGATGTGGTCAGCACGATCGGCACGTACCAGTTGGCCGTGTGTGC CATGCATCACGGCGTGCGGTTTATGGTGGTAGCGCCGAGTTCGACCTTGGATCTGATGATGGCCACTGGCGAAGATGTTGCGTTGGAAGAGCGCGATCCC GGTGAGCTGCTGGAGGTCAACGGGAAGCGCCTGGAGGTTAATGCGTTTAACCCGGTATTTGATGTGACTCCGGCCGACCTGATTGATGTGATTGTGACTG AGAAGGGCGTGGTTGAGCGGCCGGATACGGCGAAATTGGCCAAGCTGATGTGCCGTAAGCGGCTGCATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGCTGCGGTGTCTGTGAAATGGCTACCGGGGGCAAGCCCCTCCCACACTTGAATGGCGAACACAGTCAAAATGTATGAGGGGGCTTGCCCCCGATTGGC CCTGAAAGTCAATAAAACCCTCGGATCCGCCCTCAAAAAAAAGCACCACCCCATCTCTGAGCCCCTCTCGTCCCCCTCAAGCCTGTCATCCGTCAAATTA CTAGTCTCCATGCGCATCAGGGGGATAGGTGCGTGGCGGCGATTGTGATAACATCCGGCGGTTTCCAGGGCCGCCCCGAGGGGTTGCCTATAACGTGCAG ATCCGTGTCATAACTCGTTGATTTGTCGTAAGTCGTTGTCAGGCACTCTGTCGGCAGCGGCGAGCTTCGTTCGTCCCATATGGATGTGACGAGGTTTCAC CCGAAAAAGGAATCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTCGACTACGCGAT
Amino Acid Sequence
>methylthioribose-1-phosphate isomerase
MRDRLLAAEKVKAIDWRDGTLHLLDQRALPSQENWVACSTVDDVAAAIRTMVVRGAPAIGISAAYGLVLAARDRIAEGEDWQAAWEEDYALLADTRPTAS NLFWALKRMRDRLDRIKMHADPLAVLEAEAIAIHESDREANLVMAQLGVERIRKHQGNAQAILTHGNAGALATGGVGTALGVVRAAFLEGLVEHVYANET RPWLQGSRLTAWELAGEGIPVTVNADSAGAHILKTKGVTWVIVGADCIAANGDVVSTIGTYQLAVCAMHHGVRFMVVAPSSTLDLMMATGEDVALEERDP GELLEVNGKRLEVNAFNPVFDVTPADLIDVIVTEKGVVERPDTAKLAKLMCRKRLH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site