Pseudomonas sp. RIT357, BW43_RS08890
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 1 | 131 | 8.54E-22 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 145 | 377 | 7.2E-54 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 143 | 392 | 2.0E-66 |
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 6 | 116 | 1.5E-15 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 147 | 378 | 2.88881E-70 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 138 | 384 | 5.3E-58 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 2 | 133 | 3.5E-23 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 44 | 388 | 4.1E-62 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 145 | 391 | 1.57E-63 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 4 | 121 | 4.6E-13 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.