Pseudomonas sp. RIT357, BW43_RS11250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT357 contigs3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCGTTACCCGTGCGCCGTGGAGCGCCGACGAATTGGCGCGCTTCACTCGCCTCGTGCAGGACGCCGTCGGCTTTGACGCCAGTCGTGGTGACAGCGTC AGCGTGATCAACATGCCGTTCTCCGCCGAGCGCGGTGAAGTCATCGCCGAAGCGGCGTTCTACACCCAGCCGTGGTTCTGGGACATCGTCAAGCAAGTGC TGGGTGTGTTGTTCATCCTGGTGCTGGTGTTCGGTGTGCTGCGTCCGGTGCTCAACAACATCACCGGCAACGGCAAGAACAAACAGCTGGCGGCGTTTGG CGGCAGTGACGTCGAGTTGGGTGGCATGGGCGGCCTGGACGGCGAACTGGCCAACGACCGCGTCAGCCTCGGCGGCCCGCAAAGCATCCTGTTGCCAAGC CCGAGCGAAGGTTACGACGCTCAGTTGAACGCAATCAAAAGTCTGGTAGCAGAAGACCCGGGCCGTGTGGCCCAGGTCGTGAAAGAGTGGATTAACGCAG
DNA Sequence for Gene
>BW43_RS11250
ATGAGTGATCGAGCCGCTGTTGCCAAGCTCACCAAGGTCGACAAAGCCGCAGTCCTGCTGCTGTCGCTCGGTGAAACCGATGCCGCCCAAGTGCTGCGCC ACATGGGGCCCAAAGAGGTCCAGCGTGTGGGCGTGGCCATGGCGCAGATGCGCAATGTGCACCGTGAGCAAGTCGAGCAGGTGATGAGCGAGTTCGTCGA GATCGTCGGCGACCAGACCAGCCTGGGCGTCGGCTCCGACAGCTACATCCGCAAGATGCTCACCTCGGCCCTGGGCGAAGACAAGGCCAACGGCCTGATC GACCGCATCCTGTTGGGCGGCAACACCAGCGGTCTGGACAGCCTCAAGTGGATGGAACCGCGCGCCGTCGCCGACGTGATCCGCTTTGAACACCCGCAGA TCCAGGCCATCGTGGTGGCGTACCTCGATCCGGACCAAGCCGGTGAAGTGCTCGGCCATTTCGACCATAAAGTGCGCCTGGACATCATCCTGCGCGTCTC GTCGCTGAACACCGTGCAGCCGGCGGCCCTGAAAGAATTGAACACCATCCTGGAGAAGCAGTTCTCCGGCAACTCGAATGCCTCGCGGACCACCTTGGGT GGTATCAAGCGCGCGGCAGACATCATGAACTTCCTCGACAGCTCGGTCGAAGGCCAGTTGATGGACTCGATCCGCGAGATTGACGACACCCTGTCCGGCC AGATCGAAGACCTCATGTTCGTGTTCAACAACCTCTCCGATGTCGACGATCGTGGCATCCAGGCGTTGCTGCGCGAAGTGTCCTCCGACGTGCTGGTGCT TGCCCTCAAAGGCTCGGACGAAGGCGTCAAAGAGAAGATCTTCAAGAACATGTCCAAGCGTGCTTCCGAACTGTTGCGCGACGACCTGGAAGCCAAAGGC CCGGTGCGCGTCAGCGACGTAGAAACCGCGCAGAAAGAAATCCTCACCATTGCCCGCCGTATGGCCGAAGCCGGAGAAATCGTTCTCGGTGGGAAGGGCG GCGAAGAAATGATCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGCCCCTGATGTCGAACAAAGATGAGGCGCCCAGCGATCTGATTCGCGCACGGGATGTCGGTGGGTTCGACATCTGGTCGTTGCCCAGCTTCGACCCG CATGTGCCCGAGCCTGAGCCGGAACCCGTTGAAGAAACGCCGGTGGAAATGGAAGAAGTGCCGCTGGAAGAAGTCCAGCCACTGACCCTGGAAGAGTTGG AAAGCATCCGCCAGGAGGCTTACAACGAAGGCTTCGCTGCGGGTGAAAAAGACGGTTTTCGCAGCACCACTCTCAAGGTGCGCCAAGAGGCCGAAGCGGC GCTGAGCGTCAAGCTGGCCAGCCTGGAACGTTTGATGGGTGTGCTGTTCGACCCTATCGCCGAGCAGGATGCGCAGATTGAAAAATCCATGGTCGGCCTG GTGGAGCATATTGCACGCCAGGTGATCCAGCGCGAACTGGTACTCGACTCCAGCCATATCGAAAGCGTGATGCGCGAAGCACTCAAGCTGCTGCCCCTGG
Amino Acid Sequence
>flagellar motor switch protein FliG
MSDRAAVAKLTKVDKAAVLLLSLGETDAAQVLRHMGPKEVQRVGVAMAQMRNVHREQVEQVMSEFVEIVGDQTSLGVGSDSYIRKMLTSALGEDKANGLI DRILLGGNTSGLDSLKWMEPRAVADVIRFEHPQIQAIVVAYLDPDQAGEVLGHFDHKVRLDIILRVSSLNTVQPAALKELNTILEKQFSGNSNASRTTLG GIKRAADIMNFLDSSVEGQLMDSIREIDDTLSGQIEDLMFVFNNLSDVDDRGIQALLREVSSDVLVLALKGSDEGVKEKIFKNMSKRASELLRDDLEAKG PVRVSDVETAQKEILTIARRMAEAGEIVLGGKGGEEMI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site