Pseudomonas sp. RIT357, BW43_RS13830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT357 contigs25, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TATCCCTTACAGCGCTGTTTAGGGTCAGCGCGAAGAATAGGGAATGCCGCCGTGATCACACTCACTCAAGGTCCGATGAACGTACTGCTGATCAGCTGTG TACTCAGCGTCGGCATCAGTGTTCCAAGCTTTGCAGGCGATGGCGTGATCGTGACAGGGCGCAACGTACAGGCTCACATGTACGGTCGCGCCGCCTTCGG TAAAGACCCCTACCCCACCACCGCCAACGCCAATCCCAGCCGCGACATCATCGGTGCAACCGGCGAGCTCAGTGATATGGATATCGGCGGCATCAGCAGC GGCTCCAGCATCGTCGGCGCGATTCCGACGAACAACACCTTGACCGGCCTGCATGCCACGCAAAACAGCATGTCCACCCTGGGGGCCGGCTCTGCCGCCG GCCACGGTGCGGGCAGCAGCATGGGTGGACAGATCAGCGACTCGATCCAGCGCGGCATGGCGCCGCTGAACAACATCGGCAGCATGATGGGGGGCAAGTA
DNA Sequence for Gene
>BW43_RS13830
ATGAACCGCTCCCTGCTCGTTCTCGCCCTGCTGGCCGCCGCTCCTGTCTTCGCCGACAACACCGCGGTGATCAACAACAGCGGCCAACAATACGAAGGTG TCGTGTCGATCAACCAGGCGGCCGGCAACCAGCAACAAATGTCCAACAGCCGTGCCATTGCGCTCGGTGGCCAGGCCACCAACGTCAACATCCAGCGCCA GAACGGCAGCGTCGACCCGTCCCTGAACGCCAAAGCGGCGATTCATGGCACCTCTTTTACCAACGGCAACGGTGTGCTGGGTATCAACCAGTCGGCCGGG GCCAATAACCAATCAGTCAATGCCGTGCGGATCAGCATCAACCCTGGCCCGCAAAGCATTGATGACAGCGTCCTGTTGCAACAGAACTCGACGCAGTTGA CCGACTCAGGGCTCACCCCCACCACTGGCAGCCGCCAGGTCGCTACCAGCGACCAGGCCTTCACAGGCAGCCGAGGAGTGATTCAGGTGAACCAGAGTGC CGGGGTGGGGAACCGAGTGGCTAACACCCTAGGCATCACTATCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGCTTGGTAGTACTCGTTAGACCGTACCAACACTTAACCAACTAATTAGAAGCAAGGAGAAACACCATGAAACCTCAAATGGCTCTGAAACCAATGGTT TTCGCTCTCGCCGCACTCATGGCTGCTGCTGCTCAGGCAGGTGGTGGTTGGCACCCTGCGCCTCAACCAACCGGCGTTGTTGCCTCTGTCGTTACAGACG TACAAAACAGCGGCGGCAACAAGTTTGACGACACCAAAACCGAAAACAATGCCTCTGCCGACAACTCGGTAAACGGCAACAGCGGCAACACCGGTGTTAA CGTTCAGTCGGGCAGCGGTAACCAGGGGGACAACTCCGGCGCCATCTCCAGCGCCAAGGGTGACTTCGCAACAGTATTCGCTGTCGTCGATGTGAATCAA AACAGCGCGCTGAACAACTTCGTCAACAAAGGCACCCAGAACAACGCCTCTGCGGATAATTCCCTTAACGGTAACTCCGGCAACCTGGGTTACAACGGCC
Amino Acid Sequence
>autotransporter adhesin
MNRSLLVLALLAAAPVFADNTAVINNSGQQYEGVVSINQAAGNQQQMSNSRAIALGGQATNVNIQRQNGSVDPSLNAKAAIHGTSFTNGNGVLGINQSAG ANNQSVNAVRISINPGPQSIDDSVLLQQNSTQLTDSGLTPTTGSRQVATSDQAFTGSRGVIQVNQSAGVGNRVANTLGITIK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site