Pseudomonas sp. RIT357, BW43_RS22855

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT357 contigs11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCTTTCTGAATACACCTCGCGTGAAGATAGCGTTGTGCAGACGCTTTACTGCACCCACCACAACTGGCTTAACACGTGGCTGCGCGGCCGTATGGCCAA TGTCGCAGATGCAGCAGAACTGCCTCAAAACGCCTTCATGCGACTGCTGTTGGGAATCGAACGTTTTGAACTCAAGGCGCTACGGGCATTGTTGCGCACA AGTGCACGAGGGGTGGTCGTTGATCACTGGCGCCGCGAGGAGCTCGAACGAGCCTATATCGAGTCAATCGCCCATCTGTCCGAAGCGCTGAGGCGCGGGC GTTGGTATTGGAGTTACTGGAGGACATCGCCCGGCTTTTGGAAGGGTTAAAACCCGAGGTGCGTAAGGTATTTCTGATGGTTCAGTGTGATTGGCTAACG TACAAGCTGATCACAAAACAGATGGGTATATCACTGAGGTCAGTTGAGCGTTATGTCGCCGAGGCGCTTTACTACTGCTCCGTCCTGCGTTACGGCGCCA
DNA Sequence for Gene
>BW43_RS22855
ATGAATAACACCACACGCTCCGGGCCAGACTCGAGGGTGGTCAAGCAGGCCATCAGTTGGATGCTGCGCTTACGTCACAACCCCGCCAATACACGGCTGC GCCTGCAATGTGAGCAATGGCGCGAAGATCATCATGATCACGAACTGGCCTGGCAACGGGTACTGGCGCTACAACAGGAGCTCAATAGCCATCTGACCGT GATCCCCGGGGTACATAAAACACTGGAAAACAGTACACAAGGTCTGGGACGGCGGCAGGCACTGAAGTTATTGGCCGGCGCACTGCTGGTGGGCTCAACA GTATGGCTAAGCCGGGACCTGACCGGTTTGCAGCGCTGGACTTCTGACCTAGCAACAGCCCCCGGCGAGCGCCGCAGCATGCAATTGCCCGATGGCACTC GCCTGCAACTCAACACAGACAGCGCGGTAGACCTGGACTTCAATGCGCAGCAGCGTCTGATCACATTGGTGCGTGGGGAAATACTGGTGACCTGCAGTGC TGCTTCCTCTGTCCCATTGTTGGTTCAAGCTCAACACGGCTTGCTGGAAGGCATCGAAGGGCGTTTTACAGTTCGTCAGTACAGTGACTGCACGCGCTTG AATGTGGTCAGCGGTACTGTAGCGATTCACTCACCGCACAGGCCGGATGGACTTTCGACGCGCGTTCCCGCAGGTGAGAGTTACATCGTGCGTCAGACCG AAGCCATGCTTGCTCCGCCGCCAGATATGGACGTTGCTGCTTGGTCAGATGGGCTGCTCCTGACCCGAAATATGCGGTTGATCGACTTCCTTGCAGAAGT TGGGCGTTATCGCCCTGGTTATCTGGGCTGCTCAATGGATATTGCAGATCTACGGCTGTCGGGTGCATTCCGACTGGAGGACACCGATAAGTTGCTAGCG ATACTGCCACGCATACTGCCGGTACACGTGCGCTATCGCACGCGTTGGTGGGTGAGCCTGGAGCGAAGGGTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTTTCACTTTTTTTGGCGGCTTTTTTCCGTGAGTCCAGCTTAGACAGTGAGCCAGTCAATCTGCCCTCACCAGGCATCTACGGATGCTGAACATGCCAG CGTGTTTTCCCCGCAACACGTTCGACTCTTCCTACACGCTATTGGGTCAAGCCATACGCGCAGCATTGCTGTTGACGGCGCTGGGTAGCGGTACGGTACT CATCAGTGTCTCAGCGGCAGAAGCCCGCGCCGAGCAGGTCAATCAACCCTACAAGATAGCCGCAGGCCCACTGAGCCAGGTACTCAATCAGTTCTCACGA CCGATAGGCGTCACTATGTCCAGCATGCCAGCGCAAACTTAGGACCGGCACTCGGTGGGGTTACAGTGCGATGCGCTGCTTAAATGATCGCTCGGTGGAT AACATTTACCTTGATGGCTTGAAGTCCATGAGGGACAGAGGCACCTATAGCACGATGCAAGTTGCATCCGTACTTCCTGGAGCGCGTGGACATTCTCAAG
Amino Acid Sequence
>peptide ABC transporter substrate-binding protein
MNNTTRSGPDSRVVKQAISWMLRLRHNPANTRLRLQCEQWREDHHDHELAWQRVLALQQELNSHLTVIPGVHKTLENSTQGLGRRQALKLLAGALLVGST VWLSRDLTGLQRWTSDLATAPGERRSMQLPDGTRLQLNTDSAVDLDFNAQQRLITLVRGEILVTCSAASSVPLLVQAQHGLLEGIEGRFTVRQYSDCTRL NVVSGTVAIHSPHRPDGLSTRVPAGESYIVRQTEAMLAPPPDMDVAAWSDGLLLTRNMRLIDFLAEVGRYRPGYLGCSMDIADLRLSGAFRLEDTDKLLA ILPRILPVHVRYRTRWWVSLERRV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site