Pseudomonas sp. RIT357, BW43_RS22915

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT357 contigs10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCTGCAGTCAGTTCGCCATTGGCTTGCAGGGTGCTGAGCAGTTGGCTTTGCGGGAACTGGCGCATCTTTAGTGCGTATTCGATCACCGGGCCGTCGCC GCCCAATTGAGGCGCTTCGGCAGTGCCGGTAATCGGCAACACGTCCAGATACAAGTCGTTCGTCAGACGCTGGTTCAGGCGCAGCTCTTCGTTGCAGAAG TGTTCGCGCTTTTCCAGGTCGGTGAAGTCCAGAAACCCGAAATTCATCGGCTTTTTCAGTTTATAGGCGTAAGGGCCGGTCAATACGACCCATGAAATAT GGGTCTCGATGACTTGGAACGCTTCAACCGGATGAGGGTACAAAGCCGGGTTTTGCAGGGCGGCGATCAGTGACTGGCTCACGGGCGATCCTTCAGAGTC TGGGGGAAATCATGGCGCGCATTATGGCTGCTACGGACGGTCGTGCAAACCGCTGTCCGGCTCATGTTGATCATCAATAAAGTGCGTATAATCCGCCGCC
DNA Sequence for Gene
>BW43_RS22915
ATGACTCGAACCCGATCTCCCCGTTCCCGTAAAAAACCTCCTTCCCGCGGCCTGCGCCCTTGGCTTGGCTGGGCGCTCAAGCTCGGCCTCGTAGGCCTTG TGGTACTCGCCGGCTTCGCCGTGTACCTCGACGCTGTGGTCCAGGAGAAGTTCTCCGGCAAGCGCTGGACCATTCCTGCAAAGGTGTACGCGCGCCCGCT GGAATTGTTCAGCGGCCAGAAGCTGAGCAAGGATGACTTCCTTACCGAGCTCGATGCCCTCGGCTACCGCCGCGAACCCGTGAGCAACGGCCCGGGTGCG GCCGCTGTCAGCGGAAACACTGTCGACCTGAATACCCGTGGCTTCCAGTTCTATGAAGGCCTGGAAAAAGCCCAGCCGGTCCGCGTGCGCTTTTCCGGTG ATTACGTCGCCGAGTTGTCCTCCCTCAACGGCTCGAAATTGCCGGTGGTACGTCTTGAACCGTTGATGATCGGCGGGATTTACCCGAAAAACCTTGAAGA TCGCATCCTGATCAAGCTTGATCAGGTGCCTCCGTACCTGCTGGAAACTCTGGTTGCGGTAGAGGATCGCGATTTTTATAGCCACTGGGGTGTTTCGCCG AAGTCGATTGCCCGTGCGGTTTGGGTGAACACGTCCGGCGGCAAGATGACCCAGGGCGGCAGTACGCTGACTCAGCAGTTGGTGAAGAACTTCTACCTCA CCAACGAGCGCAGTCTGACCCGAAAGCTCACCGAAGCGATGATGGCTATGCTGCTTGAGCTTCACTACAGCAAGCAGGAAATCCTTGAGGCATACCTCAA CGAGGTCTTCGTCGGGCAGGATGGCCAGCGCGCGGTACATGGCTTCGGTCTGGCCAGCCAGTTCTTCTTCGGTCAGCCGCTGTCTGAGTTGAAGCTGCAT CAAGTGGCCTTGTTGGTGGGGATGGTCAAGGGGCCTTCCTACTACAACCCGCGTCGCAATCCTGAGCGTGCGCTTGAGCGTCGTAACCTGGTGCTGGATG TGCTTGAGCAGCAAGGCGTGGCCACGGCTGAGCAGGTGGCCGCAGCGAAGAAAATGCCGCTGGGTGTGACAACTCGCGGCAAGTTGGCGGACAGTTCATT CCCAGGCTTTATCGATCTGGTTAAACGTCAACTGCGTGAAGACTACCGCGACGAGGACTTGACCGAAGAAGGTTTGCGAATTTTCACCAGTTTTGACCCG ATTTTGCAGATGAAGGCCGAAGCGTCAGTCAGCGATACCTTCAAGCGTCTGACGGGTCGTAAGGGCTCCGACGAAGTAGAAGCCGCAATGGTGGTCACCA ATCCGGAAACCGGTGAAGTCCAAGCCATGATCGGCAGTCGCCAGGCGAGTTTTGCCGGATTCAATCGTGCTTTGGATGCGGTGCGGCCGATTGGTTCGCT GGTCAAGCCTGCGGTCTACCTCACTGCGTTGGAAAAACCGAGCAAGTACACCCTGACGAGCTGGCTGTCGGATGATCCGCTGTCGGTCAAAGGCGGGGAC GGCCAGGTGTGGACCCCACAGAACTTCGATCGCCGTTCCCACGGCACGGTGTTCCTGTATCAAGGCTTGGCTCACTCCTACAACATCTCTACATCTCGGC TTGGCCTGGAAGTCGGCGTGCCGAATGTCCTCAAGACGCTGGCTCGACTGGGCATCACCCGCGAATTCCCGTCGTTCCCATCGATCCTGTTGGGCGCCGG CGCCATGACGCCGATGGAAGTCGCGACCATGTACCAGACCCTCGCCAACGGTGGCTTCAACACTCCGATGCGCGGGATCCGCAGTGTACTGACGGCTGAA GGTGAGCCGCTCAAGCGCTACCCGTTCCAGATCCAGCAGCGCTTTGACGCTGGCTCTATCTACCTGATCCAGAACGCCATGCAGCGCGTGATGCGTGAAG GTACCGGTAGCTCGGTCTATAAGGTGCTTCCGTCCAACCTGACGCTGGCGGGCAAGACCGGTACCAGTAACGATTCGCGCGATAGCTGGTTTGCAGGTTT CGGTCAGGATGTACTGGCCGTGGTGTGGCTCGGTCGAGACGACAACGGTAAGACGCCTTTTACCGGTGCTACCGGTGCGTTGCAGGTCTGGACCAGTTTT ATGCGCAAGGCCGACCCGTTGCCATTGAATATGCCGCAGCCGGATAACATCGTGCAGGCCTGGATTGATCCGCATACCGGCCAGGGTTCCGACGCTAACT GTCCGGGCGCAGTACAGATGCCGTATATTCGCGGCAGCGAGCCACCACCCGGTGCTGCGTGCGGCGGCGGTGCCCCTGCGGACGCGGAATCGGTGATGGA TTGGGTCAAGGGCTGGATGAATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAAGAGGGTTTCAAGTGAACAAGTGGTGTATTCCAGCGATTACAGCTCTGGCTTTGCTCAGCGGTTGCTCCAGCGTGCAGCGCGGCTCCATTCCCGTG GTGGATTCGAGCACTGCCGTCTCCAATAGCGACCGGATCTCGGCCAATGGCGGTTTCCGCCAGACCGTGACCAACCGTCCGGCGCAGGCCAAGCCTCAGG CCGTGCCGCAAGATTCGGGCGTGGTGGTGATGGTGCCGGGCGGCGGCGCCGCTACGTCCGCACCGATCAGTGCCGAGCCATGGACTCCAGGGCCAAGCAC CTCCGGACCGATTGAGCCCACGCCGATTCAGACCGCGCCGATCAACCAGGGCACCTACAACATGCCGTCGACGCCGAGTGGCATTCCATCTTCCTCCAGT GGCGGCGGCCTTTCGGCTGACGAGCAACTGGACGGTCCGGTGCTGGCCTTGCTGACTACGGCGCAGCAACAACAGGCCGGTGGCGACCTGAACGGCGCTT
Amino Acid Sequence
>penicillin-binding protein
MTRTRSPRSRKKPPSRGLRPWLGWALKLGLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFSGQKLSKDDFLTELDALGYRREPVSNGPGA AAVSGNTVDLNTRGFQFYEGLEKAQPVRVRFSGDYVAELSSLNGSKLPVVRLEPLMIGGIYPKNLEDRILIKLDQVPPYLLETLVAVEDRDFYSHWGVSP KSIARAVWVNTSGGKMTQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLH QVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAKKMPLGVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDP ILQMKAEASVSDTFKRLTGRKGSDEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYTLTSWLSDDPLSVKGGD GQVWTPQNFDRRSHGTVFLYQGLAHSYNISTSRLGLEVGVPNVLKTLARLGITREFPSFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRSVLTAE GEPLKRYPFQIQQRFDAGSIYLIQNAMQRVMREGTGSSVYKVLPSNLTLAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRDDNGKTPFTGATGALQVWTSF MRKADPLPLNMPQPDNIVQAWIDPHTGQGSDANCPGAVQMPYIRGSEPPPGAACGGGAPADAESVMDWVKGWMN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site