Pseudomonas sp. RIT357, BW43_RS23125 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT357 contigs10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGACTATGCCATCCAGGCCATCAAGGAAGTGCTGGAAACAGAGATTCCGGTATTCGGTATCTGCCTAGGCCACCAGCTGTTGGCGTTGGCCTCCGGTGC CAAGACTCTGAAAATGGGTCATGGCCATCACGGTGCCAACCACCCTGTGCAGGACTTGGATACAGGCGTTGTGATGATCACCAGTCAGAACCACGGGTTT GCGGTGGATGAAGCGACCTTGCCGGGCAACGTCCGGGCAATTCACAAGTCGCTGTTCGACGGTTCCCTTCAAGGCATCGAACGTACCGACAAAAGCGCGT TCAGCTTCCAGGGCCACCCTGAAGCCAGCCCGGGCCCGAACGACGTAGCGCCGCTGTTCGACCGTTTCATTAATGAGATGGCCAAGCGACGCTGACTGAG CGGCCTGCGGGCGGCCCCGAAACCCGGTGGCCCCCGCAGGTTCTTCAAAGATTGTTCAAGACGGCTTGCCGATTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>BW43_RS23125 |carB
ATGCCAAAACGTACAGACATAAAAAGCATCCTGATTCTCGGCGCTGGCCCGATCGTAATCGGCCAGGCTTGCGAATTCGACTACTCCGGCGCCCAGGCTT GCAAGGCCCTGCGCGAAGAGGGCTACCGCGTCATCCTGGTGAACTCCAACCCGGCCACGATCATGACCGACCCGGACATGGCTGACGCTACCTACATCGA GCCGATCAAATGGCAAACCGTTGCCAAGATCATCGAGAAGGAGCGTCCGGACGCCCTGTTGCCAACCATGGGTGGCCAGACCGCTCTGAACTGTGCCCTG GACCTGGAGCGCGAAGGCGTCCTGGAAAAATTCGGCGTAGAGATGATCGGCGCCAATGCCGACACCATCGACAAGGCTGAAGACCGTTCGCGTTTCGACA AGGCCATGAAATCCATCGGCCTGGCGTGCCCGCGTTCCGGCATCGCCCACAGTATGGAAGAGGCCTATGCGGTTCTGGAAACCCTCGGTTTCCCGTGCAT CATTCGTCCGTCCTTTACCATGGGCGGCACCGGTGGCGGCATCGCCTACAACCGTGAAGAGTTCGAAGAAATCTGCGCCCGTGGTCTGGACCTGTCTCCG ACCAAAGAGCTGCTGATCGACGAATCCCTGATCGGCTGGAAAGAATATGAGATGGAGGTTGTCCGCGATAAGAAGGACAACTGCATCATCGTCTGCTCCA TCGAAAACTTCGATCCGATGGGCGTGCACACCGGTGACTCGATCACTGTTGCTCCTGCACAAACCCTGACGGACAAGGAATATCAGATCCTGCGTAATGC CTCCCTGGCGGTATTGCGTGAGATCGGTGTGGAAACCGGCGGTTCCAACGTCCAGTTCGGCATCTGCCCGGACACCGGTCGTATGGTCGTGATCGAGATG AACCCGCGTGTTTCCCGTTCGTCGGCCCTTGCCTCTAAAGCTACCGGCTTCCCGATTGCGAAGGTCGCGGCCAAGCTGGCTGTGGGTTACACCCTGGACG AGTTGTCGAACGACATCACCGGCGGCAAGACCCCTGCGTCCTTCGAACCGTCCATCGACTACGTAGTGACCAAGCTTCCACGTTTTGCCTTTGAGAAATT CGCCAAGGCTGACGCGCGTCTGACCACTCAGATGAAGTCGGTCGGCGAAGTTATGGCCATCGGCCGTACGTTCCAGGAGTCGTTGCAGAAAGCTCTGCGT GGTCTGGAAGTGGGGGTTTGCGGCCTCGACGAGAAGCTCGACCTGAGCAACCCGGAAAGCATGAGCGTGCTCAAGCGTGAGCTGACTGTGCCGGGCGCCG AGCGTATCTGGTACGTCGCTGACGCCTTCCGTGCCGGTATGACTGTCGAAGACATCTTCGGCATGAACATGATCGACCCATGGTTCTTGGTACAGATCGA AGATCTGATCAAGGAAGAAGAGAAGGTCAAGACCCTGGGGCTGGCTAGCATCGACCGCGACATGATGTTCCGCCTCAAGCGCAAAGGCTTCTCCGATCAG CGCCTGGCCAAACTGCTGGGTGTGACCGAGAAGAACCTGCGCACGCATCGCCATAAGTTGGACATCTTCCCGGTCTACAAGCGCGTTGATACCTGTGCGG CCGAGTTCTCCACCGATACCGCGTACCTTTACTCCACCTACGAGGAAGAGTGCGAGGCTGCGCCGTCGGGTCGTGACAAGATCATGATCCTGGGCGGCGG TCCTAACCGTATCGGCCAAGGCATCGAGTTCGACTACTGCTGTGTGCACGCTGCGCTCGCTCTGCGCGCCGACGGGTACGAGACCATCATGGTCAACTGC AACCCGGAAACTGTTTCCACCGACTACGACACCTCTGATCGGCTGTACTTCGAGCCAGTGACACTGGAAGACGTGCTGGAAATCGTGCGCGTTGAGAAGC CGAAAGGCGTGATCGTGCAGTATGGCGGCCAAACCCCGCTTAAACTGGCGCGTGCGCTTGAGGCTGCTGGAGTGCCGATTATCGGTACCAGCCCGGACGC TATCGACCGCGCTGAAGACCGTGAACGCTTCCAGCAAATGGTTGAGCGCCTTAACCTGCGTCAGCCGCCAAACGCTACCGTGCGCAGCGAAGATGAAGCC ATCCGTGCAGCCAGCAAGATCGGCTATCCGTTGGTGGTGCGTCCTTCCTATGTGTTGGGCGGTCGGGCGATGGAAATCGTCTACGAAGAGGACGAGCTCA AGCGTTACTTGCGTGATGCGGTGAAAGTGTCCAATGACAGCCCGGTGCTGCTGGACCACTTCCTCAACTGCGCCATCGAAATGGACGTGGATGCGGTTTG TGACGGCACCGACGTGGTGATCGGCGCGATCATGCAGCACATCGAGCAGGCAGGCGTTCACTCCGGTGACTCCGCATGCTCGCTGCCGCCATATTCGTTG CCGCTGCACATCCAAGATGAGATGCGCGAGCAGGTCAAGAAAATGGCCCTTGAGTTGGGTGTTGTCGGCCTGATGAACGTTCAGTTGGCGCTGCAAGGCG AAGACATCTACGTCATTGAGGTTAACCCACGTGCTTCGCGTACCGTACCGTTTGTATCCAAGTGCATCGGTGTGTCCCTGGCCATGATCGCTGCCCGTGT GATGGCTGGTAAGACCCTGAAGGAAATCGGCTTCACCAAGGAAATCATTCCGAACTTCTATAGCGTGAAAGAGGCGGTGTTCCCATTCGCCAAATTCCCT GGTGTGGACCCAATCCTGGGCCCAGAGATGAAGTCCACCGGTGAAGTGATGGGCGTGGGCGATACCTTCGGTGAAGCATTTGCCAAAGCTCAGATGGGCG CCAGTGAAGTGCTACCGACCGGCGGAACTGCGTTTATCAGTGTGCGTGATGACGACAAACCACTGGTTGCGGGCGTTGCCCGTGATCTGATCAGCTTGGG CTTTGAAGTAGTTGCCACAGCAGGTACCGCCAAGCTGATCGAAGCGGCAGGCCTGAAGGTGCGACGCGTAAACAAGGTGACGGAAGGCCGTCCGCACGTG GTCGACATGATCAAGAATGACGAAGTTACTCTGATCATCAACACCACCGAAGGTCGTCAGTCGATCGCGGATTCCTACTCTATTCGCCGTAATGCCTTGC AGCACAAGATCTACTGCACCACCACCATTGCTGCTGGCGAAGCTATCTGTGAAGCGCTCAAGTTCGGTCCGGAAAAGACCGTGCGCCGCTTGCAGGATCT ACACGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAATACCCAATGACCGTCCAGGGCGCAAAGGCCCTGGAAGAGGAGCACGCCCATCTGACCAAGGTCGTACGTCCTAAGTTGAGCCAGGACATCGGTAC GGCCCGCGAGCTGGGTGACTTGAAGGAAAACGCTGAATACCACGCTGCTCGCGAGCAGCAAGGTATGGTCGAGGCGCGGATCCGTGACATCGAAGGGCGC ATGCAGAATGCGGTCATCATCGATGTCACGACCATTCCGAAAACCGGCAAGGTGATTTTCGGCACGACCGTGGAAATCGCTAACGTCGAGACGGACGAAA GCGTGGTCTATCACATCGTTGGCGAAGACGAAGCTGATTTCAAACTCGGCAAGATCTCTGTCGGTTCGCCGCTGGCCCGCGCCTTGATTGCCAAGGAAGA GGGTGATGTGGTCGCTGTAAAAACACCTGGTGGCGTGATCGAGTACGAGATTGTTGAAGTTCGTCACGTCTGAAAGGCGGCGCCCGCTTCGTGCGGGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEAYAVLETLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDEKLDLSNPESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVKTLGLASIDRDMMFRLKRKGFSDQ RLAKLLGVTEKNLRTHRHKLDIFPVYKRVDTCAAEFSTDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRADGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAASKIGYPLVVRPSYVLGGRAMEIVYEEDELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PLHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLISLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site