Pseudomonas sp. RIT357, BW43_RS23970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008270 | zinc ion binding |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30455
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0045892 | negative regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30455
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00244 | JCVI: transcriptional regulator NrdR | IPR003796 | Ribonucleotide reductase regulator NrdR-like | 6 | 154 | 4.3E-68 |
| PANTHER | PTHR30455 | TRANSCRIPTIONAL REPRESSOR NRDR | IPR003796 | Ribonucleotide reductase regulator NrdR-like | 6 | 157 | 6.0E-60 |
| Pfam | PF03477 | ATP cone domain | IPR005144 | ATP-cone domain | 59 | 143 | 1.7E-13 |
| Coils | Coil | Coil | - | - | 88 | 108 | - |
| Hamap | MF_00440 | Transcriptional repressor NrdR [nrdR]. | IPR003796 | Ribonucleotide reductase regulator NrdR-like | 1 | 160 | 81.699234 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.