Pseudomonas sp. RIT357, BW43_RS26680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT357 contigs1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACCCACACAGTGAGCTTGTTGGCGCGTTGTATCGCGACCATCGCGGCTGGCTGTTGGCCTGGCTGAGGCGCAATGTGGCCTGCCCGAGTCGCGCCGAAG ACCTGAGTCAGGACACCTTCATGCGCCTGCTGGGCCGTGACGAGCTGCGCGCCCCCCGCGAGCCACGGGCATTTCTGGTGGCGATCGCCAAAGGCTTGCT GTTCGACTACTTCCGTCGCGCCGCCTTGGAACAGGCCTATCTCGCCGAATTAATGCTAGTCCCGGAAAGCGAACACCCTTCTGCGGAAGAACAGCAACTT ATCCTGGAAGACCTCAAGGCCATCGACCGCCTGCTCGGCAAGCTGTCGAGCAAGGCCCGCGCCGCGTTCCTCTATAACCGCCTCGACGGCCTGGGCCACG CGGAAATCGCCCAGCGCCTCGGCGTGTCAGTACCCCGTGTGCGCCAATACCTGGCCCAGGGAATTCGCCAGTGCTACATCGCGTTGTATGGCGAACCGTT
DNA Sequence for Gene
>BW43_RS26680
GTGAGTGCCATCAGCTCAAAACCGGTCTCCGCCCGTGTGCTGGATGCGGCGATTGCCTGGCAGCTGTCCCTGGATTCCGGCGACGGCAGCGCGGTGGAAC GTGAAGAGTTCAGCAAATGGTTGGCCAGCAATGAAGAACACGCTCGCGCCTGGCGCCAGCTGGGGATGCTCGACCAGCGCTTTGGCGTGGCCTCGGGCCC GGCGCGGGCGGCGTTGTTGCAATCGCGTGAAGGTATTCGCCAACGGGTGCGCAAGCTCGGTACTGGCCTGGCGAGTATCGCGCTGGTGTGCGGTTTGGCG TTGTTTGCCGGCGAGCGTTATGTGCCGATCCACTATTGGCTGGCCGACCAACGCACCGCCACTGGCGAACAGCGCACGCTGAAACTCGCGGACGGCACGC AGATCAACCTCAATACCCACAGCGCCATCGACGTACGCTTTGATGAAAAACGCCGGCTGATCGTGTTGCAGGAAGGCGAAATCCTCGTCGAGACCGGCCA CAACGACGCGCGCCCGTTCTACGTGCAAACCCGCGACGGCAGCCTGCGGGCGCTGGGCACGCGGTTTATCGTCAGGCGCGAAGACGACGCCACGCGGTTG AGCGTCTTGCAATCGGCAGTCGCGGCGCAGCCGCAAGCATTGCATCAAGAACAGATTTTCAAGGAAGGCCAGCAAGTGCTGATGCGTGGCGACGGCCTCG GCCCAGCACTGGCCGTCACCCCTGCCACCGACGCCTGGACCCGCGGCATGCTGGTGGTCGACAACGCCCGCCTGGGCGATGTGGTGGATGAGCTCAGCCG CTACCGCACCGGCTACTTGGGTGTGGATAAAAACGTGGCTGACCTGCGCATCACCGGCAGCTTCCCGCTGCACGACACCACCCTTGCGCTCAACGCTCTG CTGCCGACCCTGCCGGTGCAGATCGAGCAGCACACGCCGTGGTGGGTAACGGTCACGGGTAAGCCTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCTGGGGTGGCTGGGCTATCGCTATCGACGATTCGACTTGCCCCCGATGAGGCCCTCACACCCACCGCAAAAATATTTTGATCCTGCCCTATCACTTC TCGATTCTCGTTCGGCACATAGGCAATTGCGAATTACTTCCATTCAGGAGCCGCCCCATGTCCCGCACGCTAGACACCTTGTTGCGCCCCAGCCTGTTAG CCGTGGCTATAGCCCTCAGCGCCCCGCTGGCCAGCCCTTCACTGTTTGCCGCCGAACAAGCGTCCAGCGTGCGCGCCTACAACCTGCCGGCTGCACCGCT GGCCACCACCCTGAACCAAATCGCCAGCCAGGCCGGCATCGCGCTGACCCTCAACCCGTCGCTGGCCGCCGGCAAGACCTCGGCGCCGGTCCAGGGCCAG TTCGATGCACAAGGTGCACTGCGCGAGGCGTTGCGTGGGACTGGGTTGCAATTGGAACAGGGTGGTGCGGGGACGTTTACCTTGGTGGCGATTCCTGAGG
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MSAISSKPVSARVLDAAIAWQLSLDSGDGSAVEREEFSKWLASNEEHARAWRQLGMLDQRFGVASGPARAALLQSREGIRQRVRKLGTGLASIALVCGLA LFAGERYVPIHYWLADQRTATGEQRTLKLADGTQINLNTHSAIDVRFDEKRRLIVLQEGEILVETGHNDARPFYVQTRDGSLRALGTRFIVRREDDATRL SVLQSAVAAQPQALHQEQIFKEGQQVLMRGDGLGPALAVTPATDAWTRGMLVVDNARLGDVVDELSRYRTGYLGVDKNVADLRITGSFPLHDTTLALNAL LPTLPVQIEQHTPWWVTVTGKP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site