Strain | Pseudomonas putida S16 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCTACGCCATCATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTGGCTGCCCGCCCGGCGCACATCGAACGCCTGCAGCAACTGAAGGCCGAGGG CCGCGTGGTACTGGCCGGCCCGCACCCGGCCATCGACAGCAACGACCCGGGCGAAGCGGGTTTCAGCGGTAGCCTGATCGTTGCCGAGTTCGACTCCCTC GCCGCGGCGCAAGCCTGGGCCGATGCCGACCCTTACATTGCCGCGGGCGTGTACGAAAAGGTGGCGGTCAAGCCGTTCAAGCAAGTGCTGCCTTGATCTG AGACCGCATGGGCTTCTTCGCGGGTAAACCCGCTCCTACAGGCGCAGTGCAAGCTTGAAGCCTGCGCCGTCCCTGTGGGAGCGGGTTTACCCGCGAAGAA GGCCACGCGGTACCGGCAGTTATACTGTTGCCATCAGTCTGCGGTATCTTTGCCACTGGCGGGCCGAATAGTCGCCGTCAATGGTTGAATTGAGTGAGTC
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DNA Sequence for Gene |
>PPS_3849
ATGAGCGAGCTGTTACTGATAGATGATGACCAGGAGCTGTGCGAGCTGCTCGGCAGCTGGCTGACCCAGGAAGGGTTTACCGTGCGCGCCTGCCACGATG GCCAGAGCGCACGCCAGGCCTTGGCCACACATGCCCCGGCGGCCGTGGTGCTGGACGTGATGCTGCCCGACGGCAGTGGCCTGGAACTGCTCAAGCAGTT ACGCAGCGAGCATGCCGAACTGCCGGTACTGATGCTCTCGGCCCGCGGCGAGCCGCTGGACCGTATCCTTGGCTTGGAACTGGGCGCCGACGACTACCTG GCCAAACCTTGCGACCCGCGTGAACTCACCGCTCGCCTGCGTGCCGTGCTGCGCCGCAGCCACCCCACCGCCACCACCAGCCAGGTGGAGCTGGGCGACC TGGTCTATAGCCCTGCCCGTGGCGTGGCCAGCATCGATGGCCGTGAAATGACCCTGACCCTGTCCGAAAGCCGCATTCTCGAAGCGCTGCTGCGCCAACC CGGCGAGCCGCTGGACAAGCAGGAACTGGCGCAGATCAGCCTGGGCCGCAAGCTGACCCTGTACGACCGCAGCCTGGACATGCACGTCAGCAACCTGCGC AAGAAGATCGGCCCCCACGCCGATGGCCGGCCACGCATCGTCGCCCTGCGCAGCCGTGGCTATTACTACTGCCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACATCTTTACCGAGCCTTTACCATCCGCTGACCGCGCTTGACGGTGATCTCCCTAGACTGTGCTCATCCGGTAACCACCGGCCCATGAAAGGAGAGACAC CATGCGCAAGACCCTTATCGCCCTGATGTTCGCCGCCGCCCTGCCGACCGTGGCCATGGCCATGCCTGAAGGCGGCATGCGCCACGATGGCCCACATCAT CGCGGTGATGCGCCTTTCCACCAGCTGGACCTGAGCCGTGACCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAGCAGATGAAACAGCGCCGCGACATTA CCGAGCGCTACCTGTCCAAACTGCCGGCCGCCGACCAGAAGGCGATGAAGGACGAACTGCAGGCCAACCGCGACAAGACCGACAGCGCGGTCCGCGCCCT GCTCAAGCCCGAGCAGCAGAAGAAGTTCGACGAACTGCAGAAGGAACGCGCCGCACAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAA
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Amino Acid Sequence |
>two component transcriptional regulator
MSELLLIDDDQELCELLGSWLTQEGFTVRACHDGQSARQALATHAPAAVVLDVMLPDGSGLELLKQLRSEHAELPVLMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSHPTATTSQVELGDLVYSPARGVASIDGREMTLTLSESRILEALLRQPGEPLDKQELAQISLGRKLTLYDRSLDMHVSNLR KKIGPHADGRPRIVALRSRGYYYCL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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