Pseudomonas putida S16, PPS_3747
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S16 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGAAGATCGTCATCAAAGTGCCGCTGACCCTGGCGATCATGCCCACCCTGATGGTGATGCTGGGCAACCAGGCGTTTGCCTTCCCGCTGGTCAACGTC AACGAGATTTTCCACCTCGACCTGTCGCGCACCAACGTGGTCGACGGCCAGGAAGTGGTGATCGTACGCGACAAGGCGCTGCCGCTGTTCTACCTCAAGC GCTGGCTGGTCCAGGGCCAGGTGCACGAAGAGCAGCACGAGGGCCACGTGGTGATCCTGTCGGTCGGCACCCAGCGCATCGGCTTTGTCGTCGATCAACT GGTTGGCCAGGAAGAAGTGGTAATCAAGCCGCTGGGCAAGATGCTGCAGGGCACCCCGGGCATGTCCGGGGCCACCATCACCGGCGACGGTCGCATCGCG TTGATTCTCGACGTCCCGAGCATGCTCAAGCGTTACGCCGCGCGGCGTATTTGATTTCGGTGGCGCACCCTGGCGGGTTGCGCCGCCTAATGGAGTGTTT
|
|
| DNA Sequence for Gene |
>PPS_3747
ATGGCAGTCAAGGTCCTGGTGGTGGATGATTCCGGTTTCTTCCGCCGCCGCGTCTCGGAAATCCTCTCGGCGGATCCGACGATCCAGGTAGTGGGTACCG CGACCAACGGCAAGGAAGCAATCGACCAGGCGCTGGCGCTGAAGCCCGATGTCATCACCATGGACTACGAAATGCCCATGATGGACGGCATCACCGCGGT GCGGCACATCATGCAGCGCTGCCCGACGCCGGTGTTGATGTTCTCGTCGCTGACCCATGAAGGCGCCCGTGTCACCCTCGATGCGCTGGATGCCGGTGCG GTGGATTACCTGCCGAAGAACTTCGAGGACATCTCGCGCAACCCCGACAAGGTCAAGCAACTGCTGTGCGAGAAGGTGCATACCATTTCCCGCAGCAACC GCCGTTTTGGCAGCTACGCCAGCCATGCGCCGGTTGCCGCACCCGTACCCGCGCCAGCAGGCAGCGGTCACGCAGCTGCCAGCAGTTTCGCCAGCCCGGC AGCGGCGCGCACGCCTGCGCCTGCCCGTGCAGCGGCCCCGGCAGCGGCGCCAGCGCATTCGCCGGCACCCAAGCGCAAGCCATACAAACTGGTGGCCATC GGTACCTCCACGGGCGGCCCGGTCGCCCTGCAGCGGGTGCTGACCCAGCTGCCGGCCAACTTCCCGGCGCCGATCGTACTGATCCAGCACATGCCGGCGG CGTTCACCAAGGCCTTTGCCGAGCGCCTGGACAAGCTGTGCCGCATCAGCGTCAAGGAAGCCGAGGACGGCGACATGCTGCGCCCGGGCCTGGCCCTGCT GGCCCCAGGTGGCAAGCAGATGATGATCGACGGCCGTGGCGCGGTGAAAATCCTGCCCGGTGACGAGCGTCTGAACTACAAACCGTGCGTGGACATCACC TTCGGCTCGGCGGCCAAGTCGTATGGCGACAAGGTGCTGTCGGTGGTGCTTACCGGCATGGGTGCCGATGGTCGTGAAGGGGCGCGCCTGCTCAAGCAGG GCGGCAGCACGGTCTGGGCCCAGGATGAAGCCAGCTGCGTGATCTATGGCATGCCCATGGCCATCGTCAAGGCCAACCTGGCCGACGCGGTGTACAGCCT GGACGAAATCGGCAAGCACCTGGTGGAGGCGTGCGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGACGTGCTCAGCCTGATCGGCCTGATCCTCGCGTTTGTCGCCATCGTCGGTGGCAACTTCCTCGAAGGCGGCCATGTCGGCGCCCTGATCAATGGCCC GGCGGCACTGATCGTGCTGGGCGGCACCCTGGCGGCGGCCTTGCTGCAGTCGCCGCTGTCGTCGTTCAAGCGTGCCTTGCAGATTCTGCGCTGGATCCTG TTTCCGCCACGGGTCGACCTGGCGGGCGGGATCGACCGCGTCGTCAACTGGAGCCTGACCGCGCGCAAGGAAGGCCTGCTGGGCCTGGAAGGGGTGGCTG ACAGCGAGCCTGACCCTTATGCGCGCAAGGGCCTGCAGCTGCTGGTGGATGGTGCCGAGCCGGAGGCCATCCGCAGCATCCTCGAAGTCGACTTCCTGAC CCAGGAAAGCCGTGATATCCAGGCCGCGAAGGTGTTCGAGAGCATGGGCGGCTACGCGCCGACAATCGGCATCATCGGTGCGGTGATGGGCCTGATTCAC
|
|
| Amino Acid Sequence |
>chemotaxis-specific methylesterase
MAVKVLVVDDSGFFRRRVSEILSADPTIQVVGTATNGKEAIDQALALKPDVITMDYEMPMMDGITAVRHIMQRCPTPVLMFSSLTHEGARVTLDALDAGA VDYLPKNFEDISRNPDKVKQLLCEKVHTISRSNRRFGSYASHAPVAAPVPAPAGSGHAAASSFASPAAARTPAPARAAAPAAAPAHSPAPKRKPYKLVAI GTSTGGPVALQRVLTQLPANFPAPIVLIQHMPAAFTKAFAERLDKLCRISVKEAEDGDMLRPGLALLAPGGKQMMIDGRGAVKILPGDERLNYKPCVDIT FGSAAKSYGDKVLSVVLTGMGADGREGARLLKQGGSTVWAQDEASCVIYGMPMAIVKANLADAVYSLDEIGKHLVEACV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|