Pseudomonas syringae pv. syringae B301D-R, PSSB301D_RS03050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae str. B301D-R B301D_Contig51, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCTGGCGTAGCGGTTCATCGTCGAGTGGTGGCCGACAACTAGTGGTTATTACTCATCCCCGTTTTTCTCATGCGCCACATCACATGGCTTTACCGAACC CCGGTGTCTCTGTTGGCACGCTAACCATACAGAAAGGACCGTCTTCGCGGCTCCAGAGCCCTGGAAGGTCAGCTTGCTTTCGCCTGTTTCCTTAACCCAT AGTCCTTTTATTAGTGTGTCTGCGGCCATGAGCCGAGCCGGTTTTCGCGTGCTAGCCGATTAGCGTTTCTGCATATATTTAATTACGACCTTAATACTAC GTCGAAAAGATACGCTCCTCCCTATCAATACTAAGCACATGATCCTTGGGCGCAGGCTAAAGGTCCGCACTGTCAAAATTAACTTCAAAAAAAGTTCAAC AAATCGGATACAAGGTCGATACAAATAATTGACGCCGCCATGATGGCGTTCTAATATTGCCCTCCTTTTTGATATCAATATGCTACCGCAAGGACGCGCC
DNA Sequence for Gene
>PSSB301D_RS03050
GTGTATCCTCATGCCCTCAAACTGGCTTTGCTGCTCCTGCTCGCCATCGCGCCAGCTACCTCGCTTGCAGCCACTGCTCCAGCCAGTTTGCCAGGTGACC AGGATCTTATTCGTGACCGTCAGGATCGCCTGCTAGAAGACCAGCGCCGGCGTCTTGAAGAGCTCAAGGACCTGCCGGGCAAACAAGCTACGCCCGCTGC CCCGACTTCCCCGGCCGATACACGTTGTTTCACCATCGATCGTATCGAGCTCAAGGGCGCCGACTCGCTGTCTTCTGCCGAGCGCGATGCGCTGACCAAG CCCTATATTGGCAAGTGCCTTGGTGTCGCGCAGCTCAATGAACTGCTGAAAGTCATCACCGATCACTACCTCGAAAAAGGCCTGGTGACGACTCGCGCCT ACCTGCCGCAGCAGGACCTGTCGACAGGCGACCTGCAAGTGCTGGTCATCGAAGGCAAGCTGGAGCATCTGCGTGGCGATGCCGCCAGCGGTCTGTCAGC GCGTGAGCTGGCCATGACGTTTCCCGGCAGTGAAGGCCAGATGGTCAACCTGCGCGAAATCGAGCAGATGGTCGATCAGTTGAATCGCTTGCCGTCCAAT CAGGCACAGATGGAACTGACCCCCGGCCAGGCCGTCGGCGGCAGTGACGTAGTGGTCAAGAACACCCCGCAAAAGCCATGGCGAGCCAACCTGTCGCGTA CCAACGAAGGCCAGCGCAGCACCGGTGAGCAGCAATGGAACGCCGGCCTCGAGTGGGATAATCCGTCAGGGCTGGCCGACCAGTTCAGCCTGCGCGGCGG CCACGATGCGATCAGCGATCGGCAGAAAGCCTCCCGCAATGCCTCGCTTGCCTACAGCCTGCCGTGGGGCTGGTGGACGTTCAGCTACCTGTACAACACC AGCGAATACCGTTCGGTGGCGCAGGCCTCGAACGTCAACTTCAAGCAGGACGGCGATAGCCAGAACCACCAGTTCAAGGCCGAGCGGGTCGTGTATCGCG ACGCGCTGAGCAAGACCTCGCTCAATGCCGGTCTGTCCTACCTGCGCACCAACAACTACGTCGAAGACAGCAGACTGGCGGTCAGCAGCAATCGCATCAC CGAGGCGCAGTTCGGTATCAACCACGGGCGGCGGGTCGGCTCGGCGTTCGTCAACATCGATCTGGGCATGCAGCAAGGCATCGGTGCACTGGACGCGCAG GGCAACCACGATCCTCGCCCGGGTGAGGCCGATGCGCGGTATCGCAAATACACCGGCACCCTCAGCTACCTGCACCCCTTTCAACTGTGGGGCGAAAACC TGAGCTTTACCAGCCTGGCCACCGGGCAGCGCAGTGAGGATGTGCTGTTCAGTTCGCAACGCACCAGCCTGGGCGGATCGGCATCGGTGCGTGGTTACAA GGATGAGTTTCTGTCGGGCGACAGCGGTGGTTACTGGCGTAACGAGTTGCGCCTGACTCGCCCGGTCACCCTGGACTGGCTGCGCCCGGTGTTCGCCGAG TATGGCGCGGCCGCCGGTTACGACCAGGGTGTTATCCGCAACGACCATTACAACGGCGAGCAGCATGGGCGCTTGTCCAGCAACTCGTTCGAGCTGTTTA CCCGAGGCCAGCACGTTGCTGCCTCAGTGACCTTCGCTCATTCCCTGGAACGTCCCGATGTGATCGAGCGCGAAGCGCCGATCTATTTCCGTATGGACTT TTTCCTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCACACCGTATTCAACCCACCTGTTTCGAGGTCACTTACATGGACGTTCACCAACTGGCTCTGCTCGCTCGTCAGCCCTCTGCTGTGCTGGTCGAGCGCC GGGCTTTCTGGGGAATGCCCAAGCGCGGCCTCGCGCTGATTCTCGCCAATGCGATGTTCTGGCAGCCGCTGCTGGTTCAAGCCGAAGGCATCGTGGTCAG CGGCACGAATACCAGCCTGAACCAGGCCGGCAATGGCGTGCCGATCGTCAACATTGCCGCGCCCAATGCCAGCGGTTTGTCACACAACCAGTATCAGCAG TTCAACGTCGACAGCCAGGGCGTCATCCTCAACAACTCCACCAACCAGACCCAGAGCACTCAACTGGGCGGCATCATCGTCGGCAACGCCAACCTGCGCG GCACGGCGGCCAGCACCATTCTCAACGAAGTGGTCGGGGCCAACGCCAGTCAGCTTAAAGGCTATACGGAAGTGGCCGGGCAGGCGGCACGTGTCATCGT
Amino Acid Sequence
>ShlB family hemolysin secretion/activation protein
MYPHALKLALLLLLAIAPATSLAATAPASLPGDQDLIRDRQDRLLEDQRRRLEELKDLPGKQATPAAPTSPADTRCFTIDRIELKGADSLSSAERDALTK PYIGKCLGVAQLNELLKVITDHYLEKGLVTTRAYLPQQDLSTGDLQVLVIEGKLEHLRGDAASGLSARELAMTFPGSEGQMVNLREIEQMVDQLNRLPSN QAQMELTPGQAVGGSDVVVKNTPQKPWRANLSRTNEGQRSTGEQQWNAGLEWDNPSGLADQFSLRGGHDAISDRQKASRNASLAYSLPWGWWTFSYLYNT SEYRSVAQASNVNFKQDGDSQNHQFKAERVVYRDALSKTSLNAGLSYLRTNNYVEDSRLAVSSNRITEAQFGINHGRRVGSAFVNIDLGMQQGIGALDAQ GNHDPRPGEADARYRKYTGTLSYLHPFQLWGENLSFTSLATGQRSEDVLFSSQRTSLGGSASVRGYKDEFLSGDSGGYWRNELRLTRPVTLDWLRPVFAE YGAAAGYDQGVIRNDHYNGEQHGRLSSNSFELFTRGQHVAASVTFAHSLERPDVIEREAPIYFRMDFFL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site