Pseudomonas syringae pv. syringae B301D-R, PSSB301D_RS09775
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006099 | tricarboxylic acid cycle |
Inferred from Sequence Model
Term mapped from: InterPro:PF06039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0008924 | malate dehydrogenase (quinone) activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF06039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 478 | 498 | - |
| NCBIfam | TIGR01320 | JCVI: malate dehydrogenase (quinone) | IPR006231 | Malate:quinone-oxidoreductase | 7 | 489 | 5.7E-241 |
| PANTHER | PTHR43104 | L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL | - | - | 3 | 444 | 1.1E-24 |
| Coils | Coil | Coil | - | - | 365 | 385 | - |
| SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | IPR036188 | FAD/NAD(P)-binding domain superfamily | 5 | 324 | 1.42E-23 |
| Gene3D | G3DSA:3.50.50.60 | - | IPR036188 | FAD/NAD(P)-binding domain superfamily | 5 | 255 | 1.5E-6 |
| Pfam | PF06039 | Malate:quinone oxidoreductase (Mqo) | IPR006231 | Malate:quinone-oxidoreductase | 6 | 491 | 4.0E-228 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.