Pseudomonas syringae pv. syringae B301D-R, PSSB301D_RS10080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae str. B301D-R B301D_Contig30, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTGAAGGTCAACGTGGCCTGCGGTGCCGAGCGCAGTCTGAAAAAGGCATCCTGCACGACGTCTTCGGCGCGCGAGCGGCAACCCACGATGCGGGCCGC GATCTTGACCAGCAGCAAGTAGTTATCGACGAATGCCTGGAGTAAGGGTGAGTCGCACTTACTTGTGATTACGTGTTCCGTCATGGAATTCACCTTGCTG CTTTAACAATGGAGGGGAGGGCCGCATGGAAGGAGCAGCGCCATCACATGGGGCGACAAATTAGCCTTAATGATAATTATTGTCAAATGCGAAAGCCAAT CAGCGCACTTTAAAAGGGCGCTTTTGTCGTGCATGTCCTCGCCGCGTGCATCCGCCTAATTATTTGCAGACGCCATCCGTTCTCATTGGTGACAGGCCCG ACCACGGTTGCGGCCAGGGAATACCTCAGGAGAACCCCATGCGTTCCGATCACGCGCATCGCCGCTGTTACATCCGCGCCCACAGCCGGACGCTTTCGAT
|
|
| DNA Sequence for Gene |
>PSSB301D_RS10080
ATGAGCACGCCGGTGAGCCTGACGCTGTTCTGTCTGCCTTATTCCGGGGCCAGCGCGATGTTCTACAGCCCCTGGCGGCGCAAATTGCCGGAGTGGCTGA ACGTGCGCCCGCTGGAGCTTCCCGGCCGTGGCATGCGCATGGACGAGCCCTTGCAGACCGACATCGTGCAGCTGGCCAGTCATCTGGCCGACGAGATCAG TGCCGAACTGGACAAGCCCTATGCGCTGTTTGGCCACAGTTTGGGCGGGCTGCTGGCCTTTGAGCTGGCGCACGTCTTGCGCGAGCGCGGTCTGCCTGCG CCGCTGGCACTGTTCGCATCGGCGACTGCCGGCCCGGTGCGTCGCGATGTCAGCGAATACGCCACTGCGAAGACTGATGCGCAACTGCTCGACCGATTGC GCACGTTAAAAGGCACCAGCGAAAACGTCATCGCCAACCAAGAGCTCATGCAGTTGATGCTACCGATCCTGCGCGCCGATTTCCTGCTCTGCGGCAGCTT TGTGTATGGCAAGCGCGAGCCGCTCAGCGTGCCGATCCATGTATTTGGCGGCAAGCAGGACAGCATCAGCGTCGAGCAACTGCTCGACTGGCAGGAAGAG ACCTGCACCGGCTTCTCTCTAGACATGTTCGAGGGCCATCACTTTTATCTGGTCGACGAGCAAACGCAGCTGCTCCGTCTGCTGCGACGCTATTGCGAAC AGCACCTGACCCGCTGGCGCAACAGCGCATCACGGCAAATGAACCGGGCCGCCGGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCTGTTTGCCCCACGCGCGGCCTCCTTGCAGGGCGCGCGTCTTTTTTGAAATTCAGATTTTATCTGGCACGCCGAATCTAGCAGGAACCCCATCATGGA TGCGTTTGAACTCCCCGACACTCTGGCTCAGGCTCTTCAGCGTCGCGCCTTGCATACGCCGGATCGGCTGGCGCTGCGTTTTCTCACCGATGAGAACGAC CAGGGCCTGGTGTTGACCTACCGTGACCTGGACCTGCGCGCGCGGACCATCGCTGCTGCGCTGCAACGTCAGGCTGTGCCGGGGGATCGGGCGATTCTGC TGTTCCATAGCGGGCCGGACTATGTCGCGGCGTTCTTCGGCTGCCTGTATGCCGGGGTCATTGCCGTGCCGGCTTATCCGCCGGAATCCAACCGTCGCCA TCACCAGGAGCGCCTGCTGTCGATCATCGCCGATGCCGAGCCGCGTCTGCTGCTGACCGGCGCCGATTTGCAGCCTGCCTTGCTGCAGATGGACGAGCTG
|
|
| Amino Acid Sequence |
>thioesterase
MSTPVSLTLFCLPYSGASAMFYSPWRRKLPEWLNVRPLELPGRGMRMDEPLQTDIVQLASHLADEISAELDKPYALFGHSLGGLLAFELAHVLRERGLPA PLALFASATAGPVRRDVSEYATAKTDAQLLDRLRTLKGTSENVIANQELMQLMLPILRADFLLCGSFVYGKREPLSVPIHVFGGKQDSISVEQLLDWQEE TCTGFSLDMFEGHHFYLVDEQTQLLRLLRRYCEQHLTRWRNSASRQMNRAAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|