Strain | Pseudomonas syringae pv. syringae str. B301D-R B301D_Contig17, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGTCAAGGGTGGCACCGACAGCCAGATCGAAACCCAGAGCCTGTTCTGGCGCGAGTTGCTGCCCAGCCAGAAGCTGACCATGCACGCCGAACACGAGT TCGCCGAGCAGATCAAGGCGATCGGCCCGATCACCCACATCCGCCTGAACGTATTCCCGGACGGTGGCGTGAGCCGCCTGCGAGTGCTGGGCAAGGTGGC CAGGTAACAACGCATAAACTCTCGTTCCTACGTTCGGCGCTCATCATATACATAAGTCCTGGAGCGCCCTGAATAAAAGGCTGCCAGGCTTCTGCCCGAA GGGCGTAGGAGCGGACCGGGCGACGCTTCGCTTGTTCGCGAAGACGGTGTTTCAGACGACGCATTTTTGGAGAATGTACCGGCCCTTTCGCGAACAAGCG AAGCGTCGCCCGGTCCGCTCCTACGGCCTCCGGCCAGAATCCAAAGCGGATTTGTGTATAACGATGAGCGCACCCTCAAAACCATTGAAGAAGAACCCGC
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DNA Sequence for Gene |
>PSSB301D_RS13965
ATGCGCAAACTGATAATCGAGCCACTGACCAAGGAAGCCTTTGCGCCATTCGGTGATGTGATCGAAACCGACGGCAGCGATCACTTCATGATCAACAACG GCTCGACCATGCGCTTTCATCGTCTGGCTGACGTGCAGACCGCGCAGCCCGAGGACAAGGCGATCATCAGCATCTTCCGCGCCGAAGCGCTGCCGATGCC GTTGACCATCGGCATGCTGGAGCGTCATCCGCTGGGCAGTCAGGCGTTCGTGCCGCTGCTCGGCAACCCCTTTCTGATCGTGGTCGCGCCGGTTGGCGAT GTGCCTGAATCAGAGCTGACCCGCGCCTTCGTGTCGAACGGCAGGCAGGGTGTCAATTACCATCGCGGCGTCTGGCACCATCCGGTGCTGACGATCGAAA AGCGGGATGACTTCCTGGTGGTTGATCGCAGTGGCGAAGGCAACAACTGCGACGAGCATTACTTTGCCGAGAGCCAGTTGCTGGTTCTCGATCCCCACCC ACTGGAAGGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACATCGTGCTGGCACATATGATGGAATGGCTGAATCTGGGCGTGCGCTGGATTCACATGATTGTCGGCGTCGCCTGGATCGGCGCATCGTTCTACTTCGT CTGGCTGGAGAACAACCTCAACCGCAGCAACCCGCGTGAAGGCCTGTCGGGTGATCTGTGGGCGATCCACGGCGGCGGCATCTACCACCTGGAGAAGTAC AAGCTCGCACCACCGACCATGCCGGAGAATCTGCAATGGTTCAAATGGGAAGCCTATTCGACCTGGCTGTCAGGGGTCGCGCTGTTGTGCGTGGTGTTCT ACGCCAACCCGACGCTGTACCTGCTGGCACCGGGCAGCAGCCTGAGTGGCGCCGAGGGCGTGCACATCGGCCTGGGTTCGTTGTTCGTCGGCTGGTTCAT CTACAGCTTTCTGTGTGACTCGCCACTGGGCAAACGCCCTGCCATGTTGGGCGTGGTCCTGTTCGTGCTGCTGGTGGCGGCGGCGTACGGGTTCAGCAAA
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Amino Acid Sequence |
>ureidoglycolate hydrolase
MRKLIIEPLTKEAFAPFGDVIETDGSDHFMINNGSTMRFHRLADVQTAQPEDKAIISIFRAEALPMPLTIGMLERHPLGSQAFVPLLGNPFLIVVAPVGD VPESELTRAFVSNGRQGVNYHRGVWHHPVLTIEKRDDFLVVDRSGEGNNCDEHYFAESQLLVLDPHPLEG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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