Strain | Pseudomonas syringae pv. syringae str. B301D-R B301D_Contig16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CATTTCCGGTGCGACCATTCTGGGTGACGGCCAAGTGGTGCTGATTCTTGATCTGATGGCGCAGATTCGTAACTTGCAGGGCTTGCCTTTCCGAGGGCTT ATGGCGCCTGCCTATCACGAAGTCGAGCACGCCAGACCGTTGCTGGTGATGGTGGTGGACGATTCGGTGACGGTGCGCAAAGTTACCAGCCGTCTGCTGG AACGCCACGGTATGCACGTGCTGACCGCCAAGGACGGTGTTGATGCCATGACCCTGTTGCAGGAGCACACCCCCGACATCATGCTGCTCGATATCGAAAT GCCGCGCATGGACGGCTTTGAAGTGGCCAGTCAGATCCGCCAGGACGAACAGCTCAAGGACCTGCCCATCATCATGATCACCTCCCGATCGGGCCAGAAG CATCGCGATCGGGCGATGGCGGTAGGCGTCAACGAGTACCTGAGCAAGCCGTATCAGGAAACCGTGTTGCTGGAGAGCATCGCTTACTGGAGTCAGGCGC
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DNA Sequence for Gene |
>PSSB301D_RS14795
ATGTCTGAAGGCACGTTCCAGACCAGTCGTCTGACCAGCCTGACCGGCTTGCTGGTGCCGTTGAGTGACCGGCATCTGCTGCTGCCCAACGTCGCGGTCG CAGAGTTGATCGATTACCAGGATTGCAGCGCAGAGCCGGGCGCCCCCGAGTGGTATCTGGGGCCGATCATCTGGCGCGAACTGACCTTGCCGCTGCTCAG CTTCGAAGCCGCCTGCGGAGGCCGCACACGTGTCGGCGGCCGAGCCCGGATCGTGGTGCTCAACGCACTGGGCGGACGCAACGACGTCAGGTTCATCGCC CTGCTGACCCAGGGCATCCCGCGCTCGTGCAAGGTCGACAGCCAGTTGAGCTACGTCGACGTCCCGCTGGCCGAACTGGAACTGGCCGCCGTACAGATCG GCGAAACCATAGCCCGCATTCCCGACCTCGAAGGGCTGGAGCAATGGCTGGTGGATGCAGGGCTGTCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTAAAGAGGACGCGGAGCGTCCAGAACTGCATGCGACGCGGAGCGCCGCACGATAGTTAGATGGTGTTCTTGCGGGCGCCTATCGTTCCTCACGCTCCAG CGTGGGAATGCCTTTCGTGACGCTCTGCGTCACAGATCTGCGCCGCACCGCACACTCAAGGCAGGACGCGGAGCGTCCAGAACTGCATGCGACGCGGAGC GCCGCACGATAGTTACAGGAGAGCGTCCAGAACGGCATGCCTACGCTGGAGCATGGCCACGATAGGGGTCAAATGCCTCACGACGAACAGCTGATTTCCA GGTGCTTGCCCCAGTCCGGCGGGCGTTGGGCGTAGCCTTGCATGCCGGGCTGTTCGGTGAAGGGGGTGCAGAGCACCTGATGCAGGCGGCGTACTTCTTC GTAGTCGCCTTTTTCCGCAGCAGCGATGGCGTTCTGCGCCAGGTAGTTGCGCAGGATGTACAGCGGATTGACTGCATGCATGCGGGTCTGACGCTCCTGC
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Amino Acid Sequence |
>chemotaxis protein
MSEGTFQTSRLTSLTGLLVPLSDRHLLLPNVAVAELIDYQDCSAEPGAPEWYLGPIIWRELTLPLLSFEAACGGRTRVGGRARIVVLNALGGRNDVRFIA LLTQGIPRSCKVDSQLSYVDVPLAELELAAVQIGETIARIPDLEGLEQWLVDAGLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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