Pseudomonas syringae pv. syringae B301D-R, PSSB301D_RS14800

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 476 574 2.90739E-13
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 917 1099 1.96E-36
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 618 755 5.0E-28
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1261 1374 1.7E-36
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 619 716 9.8E-10
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 619 717 3.84461E-12
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 478 567 5.9E-14
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 17 115 4.17228E-9
Coils Coil Coil - - 814 834 -
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1263 1374 4.62212E-33
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 619 741 6.02E-25
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 17 119 7.6E-5
SMART SM00260 chew_2 IPR002545 CheW-like domain 1093 1236 4.3E-23
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 172 271 8.5E-12
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 19 113 3.2E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 312 440 2.6E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 170 293 1.44E-19
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 960 1101 7.6E-23
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 16 149 1.8E-23
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1263 1374 4.0E-29
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1101 1232 3.66E-25
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 916 1100 1.6E-59
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1260 1379 1.42E-37
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1005 1019 6.9E-11
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1172 1234 1.7E-20
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 964 1099 4.9E-14
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 170 259 1.94706E-7
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1061 1079 6.9E-11
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 471 600 3.2E-29
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 170 273 0.059
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 476 573 7.0E-9
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 17 146 3.66E-24
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1085 1098 6.9E-11
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1106 1238 6.0E-24
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 313 433 3.92E-16
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 505 1374 0.0
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 476 596 2.49E-27
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 776 915 7.6E-9
Gene3D G3DSA:3.40.50.2300 - - - 1263 1382 1.4E-41
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 621 721 3.3E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 166 296 1.8E-16
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 914 1100 1.6E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.