Pseudomonas syringae pv. syringae B301D-R, PSSB301D_RS17435 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae str. B301D-R B301D_Contig11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
|
|
| DNA Sequence for Gene |
>PSSB301D_RS17435
|obgE
GGTGGGGGCGGCTCGTTCTTCATGGTCGCCGACGTCAACCTGAACACGCTGGTCGACTACCGTTACCCCCGCCACTTCGACGCCGAGCGCGGCTCCAACG GTGGCAGCGCCGACTGCACCGGTCGCAAGGGTGAAGAGCTGGTGCTGCGTGTGCCGGTCGGGACCACCATCATCGACGCCACTACTCAGGAAATCATCGG TGACCTGACCAAGGACGGTCAGCGCCTGATGGTTGCGCAGGGCGGCTGGCACGGTCTGGGTAACACCCGATTCAAGTCCAGTACCAACCGCGCTCCGCGC CAGACCACACCGGGCAAGCCGGGTGATCAGCGTGATCTCAAGCTCGAGCTGAAAGTGCTGGCCGACGTCGGCCTGCTCGGTCTGCCAAATGCCGGTAAGA GCACCTTCATCCGTTCGGTGTCTGCGGCCAAGCCGAAGGTTGCCGACTATCCGTTCACCACGCTGGTGCCGAACCTGGGCGTGGTCAGTGTCGATCGCTG GAAAAGCTTTGTGGTTGCCGACATTCCAGGTCTGATCGAGGGTGCATCCGACGGCGCGGGCCTGGGGATTCGCTTCCTCAAGCACCTGGCGCGTACCCGT CTGTTGCTGCACCTCGTCGATATGGCGCCACTGGATGAAAGCAGTGCTCCGGATGCGGCTGAAGTGATCGTCAACGAGCTGGAGAAATTCAGCCCGTCGC TGGCCGAGCGTGATCGCTGGCTGGTGCTGAACAAGTGCGATCAGATTCTCGAAGAGGAGCAGGAAGCGCGCAAGCAGGAGATCGTCGATCGTCTGGAGTG GACCGGCCCGGTTTACGTGATCTCTGCCATTGCCAAAGAAGGCACCGAGCAACTGACCCGCGACATCATGCGTTACCTTGAAGAGCGCAGCCAGCGTATC GCCGAAGAGCCTGGTTACGCCGAAGAGCTGGCCGAGCTCGATCAGCGCATCGAAGACGAAGCCCGTGCCCAGTTGCAGGCACTGGACGATCAGCGTGCCC TGCGTCGCAGTGGCGTGAAGAGCGTGCATGACATCGGTGACGATGACTGGGATGAAGAAGATGTGGACGATGAAGATGGTCCGGAAATCATTTACGTCCG TGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGCTTGAAGTAAACTTGAACGCCGCTACGATTGTTAGCGGCGTTTTTGTATCCCGAATTTGAAAATCTCTGGCTAGGGTTGGAAGAAGATGCGCAGCAA AGTGACGGGCGCCCAGCGCTGGGTTGTGAAGATTGGCAGTGCCTTGCTGACGGCGGATGGCAAGGGTCTGGATCGCAACGCCATGGGTGTTTGGGTGGAG CAGATGGTGGCGCTGCACGAGGCGGGTGTCGAGCTGGTACTGGTGTCTTCCGGGGCGGTGGCTGCCGGCATGAGCCGTCTTGGCTGGACGGCCCGACCCA GCGCCATGCATGAGCTTCAGGCTGCTGCGGCGATTGGTCAGATGGGCTTGGTGCAGGCGTGGGAATCGAGCTTCGCCGAGCATGGCCGACATACCGCGCA GATCCTTCTGACTCACGATGACCTGTCGGATCGCAAGCGCTACCTGAATGCCCGTAGCACCCTGCGCACGCTGGTCGAGCTTGGGGTTGTGCCGGTCATC
|
|
| Amino Acid Sequence |
>GTPase CgtA
GGGGSFFMVADVNLNTLVDYRYPRHFDAERGSNGGSADCTGRKGEELVLRVPVGTTIIDATTQEIIGDLTKDGQRLMVAQGGWHGLGNTRFKSSTNRAPR QTTPGKPGDQRDLKLELKVLADVGLLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPNLGVVSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLARTR LLLHLVDMAPLDESSAPDAAEVIVNELEKFSPSLAERDRWLVLNKCDQILEEEQEARKQEIVDRLEWTGPVYVISAIAKEGTEQLTRDIMRYLEERSQRI AEEPGYAEELAELDQRIEDEARAQLQALDDQRALRRSGVKSVHDIGDDDWDEEDVDDEDGPEIIYVRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|